Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC4P56524 PTP4A1P7-201ENST00000423476 514 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC115285.1-201ENST00000424879 736 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC4P56524 AC114973.1-201ENST00000429057 632 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC4P56524 FABP5P3-201ENST00000437960 408 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC006466.1-201ENST00000438721 289 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 ELOCP10-201ENST00000440624 327 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC4P56524 RPS3AP53-201ENST00000454716 778 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 RNU6-1218P-201ENST00000458990 108 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC090686.1-201ENST00000481577 749 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC4P56524 RN7SL558P-201ENST00000497468 299 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC010627.1-201ENST00000503819 1294 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 GAPDHP56-201ENST00000506031 988 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC096571.1-202ENST00000506634 735 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC4P56524 RN7SKP46-201ENST00000515942 234 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 RNA5SP303-201ENST00000516192 130 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 NPM1P6-201ENST00000521088 871 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC118942.1-201ENST00000529674 1035 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HDAC4P56524 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.06□□□□□ -1.6
HDAC4P56524 AC010735.1-201ENST00000567305 1026 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC4P56524 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC4P56524 MIR4646-201ENST00000580775 63 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 RN7SL52P-201ENST00000584271 284 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC4P56524 AL606834.3-201ENST00000602615 496 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 ELOCP34-201ENST00000604436 327 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AL158196.1-201ENST00000616786 434 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AC087385.3-201ENST00000620477 187 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC4P56524 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC4P56524 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC4P56524 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC4P56524 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC4P56524 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC4P56524 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HDAC4P56524 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HDAC4P56524 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 AC008549.2-201ENST00000333482 706 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HDAC4P56524 RNU5E-10P-201ENST00000363506 118 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 RAB28P1-201ENST00000411517 641 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.05□□□□□ -1.6
HDAC4P56524 RGS17P1-201ENST00000423358 553 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AL645608.4-201ENST00000423619 154 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 AL590762.4-201ENST00000425885 253 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.05□□□□□ -1.6
HDAC4P56524 ETF1P3-201ENST00000430422 1160 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.05□□□□□ -1.6
HDAC4P56524 AC092013.1-201ENST00000438795 332 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.05□□□□□ -1.6
HDAC4P56524 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.05□□□□□ -1.6
HDAC4P56524 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.05□□□□□ -1.6
HDAC4P56524 PTMAP3-201ENST00000447474 330 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.05□□□□□ -1.6
HDAC4P56524 snoU109.3-201ENST00000459477 145 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 RPL23AP12-201ENST00000467573 473 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AC093267.1-201ENST00000489176 961 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AC005912.1-201ENST00000495392 255 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 RNA5SP249-201ENST00000516127 99 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 RNU6-709P-201ENST00000517257 104 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.05□□□□□ -1.6
HDAC4P56524 AC021006.3-201ENST00000530771 192 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 SNORA74C-1-201ENST00000580726 201 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AP000919.1-202ENST00000581139 1264 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 OR7A19P-201ENST00000608051 733 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.05□□□□□ -1.6
HDAC4P56524 AC007497.1-201ENST00000610421 561 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 CR381572.2-201ENST00000624852 397 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HDAC4P56524 AC093311.1-201ENST00000506586 2021 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 DDX18P4-201ENST00000511690 1966 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 SMG1P6-201ENST00000532337 2930 ntBASIC5.05□□□□□ -1.6
HDAC4P56524 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC4P56524 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
HDAC4P56524 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms