Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 AC087190.4-201ENST00000574616 8334 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RNA5SP27-201ENST00000363839 119 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RNA5SP428-201ENST00000365129 132 ntBASIC4.38□□□□□ -1.71
CDH11P55287 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 SNORD65C-201ENST00000390962 71 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RPL23AP59-201ENST00000399415 461 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AL021331.1-201ENST00000402817 582 ntBASIC4.38□□□□□ -1.71
CDH11P55287 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH11P55287 VTA1P1-201ENST00000414044 866 ntBASIC4.38□□□□□ -1.71
CDH11P55287 USP9YP21-201ENST00000420603 432 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 AC022022.1-201ENST00000430304 178 ntBASIC4.38□□□□□ -1.71
CDH11P55287 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 AL353093.1-201ENST00000441292 436 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 OR7E125P-201ENST00000443450 846 ntBASIC4.38□□□□□ -1.71
CDH11P55287 HSFY3P-201ENST00000444242 1191 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RPL7L1P1-201ENST00000448259 785 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 AL009048.1-201ENST00000450437 298 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AL133244.1-201ENST00000456007 258 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RPL7P48-201ENST00000461513 746 ntBASIC4.38□□□□□ -1.71
CDH11P55287 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 RPS4XP18-201ENST00000495480 763 ntBASIC4.38□□□□□ -1.71
CDH11P55287 RN7SL558P-201ENST00000497468 299 ntBASIC4.38□□□□□ -1.71
CDH11P55287 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH11P55287 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 AC091163.3-201ENST00000518269 1144 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH11P55287 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 CYB5AP5-201ENST00000549779 389 ntBASIC4.38□□□□□ -1.71
CDH11P55287 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 AC122134.1-201ENST00000565664 1104 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 SNORA74C-1-201ENST00000580726 201 ntBASIC4.38□□□□□ -1.71
CDH11P55287 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH11P55287 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 AP002906.1-201ENST00000603405 233 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC105254.2-201ENST00000603636 436 ntBASIC4.38□□□□□ -1.71
CDH11P55287 MEMO1P5-201ENST00000604810 406 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC005377.1-201ENST00000605126 456 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC096586.1-201ENST00000610267 561 ntBASIC4.38□□□□□ -1.71
CDH11P55287 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 AL078595.3-201ENST00000623815 1166 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AL590396.4-201ENST00000636779 956 ntBASIC4.38□□□□□ -1.71
CDH11P55287 AC009452.1-201ENST00000640823 606 ntBASIC4.38□□□□□ -1.71
CDH11P55287 LINC01808-202ENST00000641680 1116 ntBASIC4.38□□□□□ -1.71
CDH11P55287 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH11P55287 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CDH11P55287 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CDH11P55287 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH11P55287 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
CDH11P55287 CASC19-204ENST00000641001 2055 ntBASIC4.37□□□□□ -1.71
CDH11P55287 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 AC008758.3-201ENST00000507003 1829 ntBASIC4.37□□□□□ -1.71
CDH11P55287 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 AL445487.1-201ENST00000415694 1580 ntBASIC4.37□□□□□ -1.71
CDH11P55287 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 SNORD96B-201ENST00000386148 79 ntBASIC4.37□□□□□ -1.71
CDH11P55287 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH11P55287 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH11P55287 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 HMGB3P18-201ENST00000406327 590 ntBASIC4.37□□□□□ -1.71
CDH11P55287 AC105402.1-201ENST00000413336 545 ntBASIC4.37□□□□□ -1.71
CDH11P55287 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH11P55287 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH11P55287 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 TDGF1P1-201ENST00000445734 527 ntBASIC4.37□□□□□ -1.71
CDH11P55287 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 RPL31P44-201ENST00000447680 377 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms