Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATF4P18848 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 RNA5SP218-201ENST00000363188 109 ntBASIC5.6□□□□□ -1.51
ATF4P18848 LCN1P2-201ENST00000372030 223 ntBASIC5.6□□□□□ -1.51
ATF4P18848 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 RNU6-1103P-201ENST00000384150 107 ntBASIC5.6□□□□□ -1.51
ATF4P18848 RPS3AP5-201ENST00000389400 821 ntBASIC5.6□□□□□ -1.51
ATF4P18848 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATF4P18848 AL034417.1-201ENST00000399343 800 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 AC069157.1-201ENST00000421749 137 ntBASIC5.6□□□□□ -1.51
ATF4P18848 NMD3P2-201ENST00000421815 761 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 SNX18P3-201ENST00000424993 835 ntBASIC5.6□□□□□ -1.51
ATF4P18848 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 RPL12P18-201ENST00000437175 325 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AL590004.3-202ENST00000445883 451 ntBASIC5.6□□□□□ -1.51
ATF4P18848 Z95327.1-201ENST00000446082 482 ntBASIC5.6□□□□□ -1.51
ATF4P18848 WASF1P1-201ENST00000447560 1131 ntBASIC5.6□□□□□ -1.51
ATF4P18848 CDC42P2-201ENST00000448566 569 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 AL035090.1-201ENST00000454835 332 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC004692.1-201ENST00000455430 424 ntBASIC5.6□□□□□ -1.51
ATF4P18848 RPS18P13-201ENST00000461260 454 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC022415.1-202ENST00000486612 523 ntBASIC5.6□□□□□ -1.51
ATF4P18848 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 RPL15P21-201ENST00000495592 567 ntBASIC5.6□□□□□ -1.51
ATF4P18848 MTCO3P44-201ENST00000510977 541 ntBASIC5.6□□□□□ -1.51
ATF4P18848 ARL2BPP6-201ENST00000512757 439 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC120036.3-201ENST00000517826 292 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 AL356432.3-201ENST00000568952 465 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC002310.3-201ENST00000569728 723 ntBASIC5.6□□□□□ -1.51
ATF4P18848 RN7SL42P-201ENST00000579786 294 ntBASIC5.6□□□□□ -1.51
ATF4P18848 MIR5192-201ENST00000579892 92 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC015801.1-201ENST00000585651 153 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC006504.3-201ENST00000586818 523 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC067852.4-201ENST00000590314 478 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC068790.3-201ENST00000602988 553 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC067959.1-201ENST00000604334 379 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC004853.1-201ENST00000604902 698 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.6□□□□□ -1.51
ATF4P18848 AC012488.1-201ENST00000611221 640 ntBASIC5.6□□□□□ -1.51
ATF4P18848 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.6□□□□□ -1.51
ATF4P18848 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 AC022743.1-201ENST00000624990 664 ntBASIC5.6□□□□□ -1.51
ATF4P18848 METAP1-212ENST00000625963 147 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.6□□□□□ -1.51
ATF4P18848 MIR3688-2-201ENST00000636963 87 ntBASIC5.6□□□□□ -1.51
ATF4P18848 AC000095.2-202ENST00000637415 154 ntBASIC5.6□□□□□ -1.51
ATF4P18848 LRRC77P-213ENST00000637727 880 ntBASIC5.6□□□□□ -1.51
ATF4P18848 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.6□□□□□ -1.51
ATF4P18848 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
ATF4P18848 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF4P18848 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 PABPC1P7-201ENST00000413177 1513 ntBASIC5.59□□□□□ -1.51
ATF4P18848 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATF4P18848 WASF5P-205ENST00000428639 1455 ntBASIC5.59□□□□□ -1.51
ATF4P18848 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF4P18848 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.59□□□□□ -1.51
ATF4P18848 EEF1A1P26-201ENST00000458319 1363 ntBASIC5.59□□□□□ -1.51
ATF4P18848 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 OR4K15-201ENST00000305051 1216 ntBASIC5.59□□□□□ -1.51
ATF4P18848 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATF4P18848 RNY1P12-201ENST00000364251 105 ntBASIC5.59□□□□□ -1.51
ATF4P18848 RNU1-16P-201ENST00000365477 164 ntBASIC5.59□□□□□ -1.51
ATF4P18848 Y_RNA.402-201ENST00000383972 102 ntBASIC5.59□□□□□ -1.51
ATF4P18848 Y_RNA.573-201ENST00000384763 105 ntBASIC5.59□□□□□ -1.51
ATF4P18848 HMGB3P1-201ENST00000393368 573 ntBASIC5.59□□□□□ -1.51
ATF4P18848 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.59□□□□□ -1.51
ATF4P18848 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF4P18848 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.59□□□□□ -1.51
ATF4P18848 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms