Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL358472.1-201ENST00000431295 329 ntBASIC4□□□□□ -1.77
TNFP01375 RPL7L1P1-201ENST00000448259 785 ntBASIC4□□□□□ -1.77
TNFP01375 RPS6P2-201ENST00000454208 705 ntBASIC4□□□□□ -1.77
TNFP01375 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TNFP01375 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4□□□□□ -1.77
TNFP01375 AC138409.2-202ENST00000507274 458 ntBASIC4□□□□□ -1.77
TNFP01375 NPM1P41-201ENST00000512920 831 ntBASIC4□□□□□ -1.77
TNFP01375 HMGB1P23-201ENST00000518743 568 ntBASIC4□□□□□ -1.77
TNFP01375 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4□□□□□ -1.77
TNFP01375 MTCO1P49-201ENST00000523429 802 ntBASIC4□□□□□ -1.77
TNFP01375 MED28P5-201ENST00000528254 438 ntBASIC4□□□□□ -1.77
TNFP01375 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4□□□□□ -1.77
TNFP01375 AC022882.1-201ENST00000532142 501 ntBASIC4□□□□□ -1.77
TNFP01375 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4□□□□□ -1.77
TNFP01375 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4□□□□□ -1.77
TNFP01375 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4□□□□□ -1.77
TNFP01375 AC110743.1-201ENST00000584870 478 ntBASIC4□□□□□ -1.77
TNFP01375 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4□□□□□ -1.77
TNFP01375 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4□□□□□ -1.77
TNFP01375 AC124856.1-201ENST00000600819 896 ntBASIC4□□□□□ -1.77
TNFP01375 AL451044.1-201ENST00000604867 238 ntBASIC4□□□□□ -1.77
TNFP01375 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4□□□□□ -1.77
TNFP01375 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4□□□□□ -1.77
TNFP01375 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4□□□□□ -1.77
TNFP01375 AC104118.1-201ENST00000607625 1589 ntBASIC4□□□□□ -1.77
TNFP01375 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TNFP01375 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TNFP01375 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TNFP01375 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TNFP01375 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFP01375 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TNFP01375 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFP01375 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TNFP01375 SKP1P3-201ENST00000429280 487 ntBASIC3.99□□□□□ -1.77
TNFP01375 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.99□□□□□ -1.77
TNFP01375 RPS29P7-201ENST00000439662 171 ntBASIC3.99□□□□□ -1.77
TNFP01375 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 AC073587.1-201ENST00000447093 876 ntBASIC3.99□□□□□ -1.77
TNFP01375 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.99□□□□□ -1.77
TNFP01375 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 RAD23BP3-201ENST00000454157 1152 ntBASIC3.99□□□□□ -1.77
TNFP01375 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFP01375 AC091959.2-201ENST00000477363 321 ntBASIC3.99□□□□□ -1.77
TNFP01375 AC135999.1-201ENST00000478962 479 ntBASIC3.99□□□□□ -1.77
TNFP01375 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TNFP01375 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.99□□□□□ -1.77
TNFP01375 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 RNU7-143P-201ENST00000516781 65 ntBASIC3.99□□□□□ -1.77
TNFP01375 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 AC091516.1-201ENST00000549191 703 ntBASIC3.99□□□□□ -1.77
TNFP01375 AC090912.3-201ENST00000609775 533 ntBASIC3.99□□□□□ -1.77
TNFP01375 MIR6868-201ENST00000611215 58 ntBASIC3.99□□□□□ -1.77
TNFP01375 AC099669.2-201ENST00000616549 437 ntBASIC3.99□□□□□ -1.77
TNFP01375 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFP01375 AC006840.1-201ENST00000623069 542 ntBASIC3.99□□□□□ -1.77
TNFP01375 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFP01375 DDX18P4-201ENST00000511690 1966 ntBASIC3.99□□□□□ -1.77
TNFP01375 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFP01375 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.99□□□□□ -1.77
TNFP01375 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFP01375 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
TNFP01375 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 AC016588.2-201ENST00000632484 3021 ntBASIC3.98□□□□□ -1.77
TNFP01375 HCFC2P1-201ENST00000392864 1592 ntBASIC3.98□□□□□ -1.77
TNFP01375 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFP01375 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TNFP01375 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFP01375 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFP01375 SNORA48.7-201ENST00000391302 135 ntBASIC3.98□□□□□ -1.77
TNFP01375 HDGFP1-201ENST00000405943 252 ntBASIC3.98□□□□□ -1.77
TNFP01375 CYCSP10-201ENST00000417973 294 ntBASIC3.98□□□□□ -1.77
TNFP01375 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFP01375 PDSS1P1-201ENST00000422953 1114 ntBASIC3.98□□□□□ -1.77
TNFP01375 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFP01375 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFP01375 AC005008.1-201ENST00000456151 612 ntBASIC3.98□□□□□ -1.77
TNFP01375 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFP01375 DEFB109F-201ENST00000491870 277 ntBASIC3.98□□□□□ -1.77
TNFP01375 KRT19P6-201ENST00000510983 209 ntBASIC3.98□□□□□ -1.77
TNFP01375 AC023632.4-201ENST00000517783 191 ntBASIC3.98□□□□□ -1.77
TNFP01375 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFP01375 OR7E10P-201ENST00000526420 991 ntBASIC3.98□□□□□ -1.77
TNFP01375 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms