Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IGBP1P5-201ENST00000507524 1000 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 snoZ278.1-201ENST00000517059 112 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 RN7SKP283-201ENST00000517197 270 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 RNA5SP373-201ENST00000517271 95 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM38O00635 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 AP001922.4-201ENST00000526967 290 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 CBX3P7-201ENST00000532876 502 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC007834.2-201ENST00000536310 343 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM38O00635 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 OSBPL9P5-201ENST00000542581 171 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM38O00635 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC012213.3-201ENST00000577199 777 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC011840.5-201ENST00000582125 771 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC009027.1-201ENST00000604510 479 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 AL353726.1-201ENST00000614041 1000 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 AL121895.2-201ENST00000619558 447 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 CR392039.4-201ENST00000624968 501 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM38O00635 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM38O00635 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM38O00635 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 AC099786.3-201ENST00000565735 1410 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM38O00635 SNORA17.1-201ENST00000362945 126 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM38O00635 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM38O00635 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM38O00635 RNU2-65P-201ENST00000410162 185 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC234782.4-201ENST00000417646 1048 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 GTF2IP2-201ENST00000424290 697 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 FABP7P2-201ENST00000429946 379 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 MTCO3P5-201ENST00000433620 714 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 HMGB1P45-201ENST00000435986 653 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 RPS11P7-201ENST00000442125 465 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 H2AFZP6-201ENST00000444403 394 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 GAPDHP25-201ENST00000447061 1001 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 ZNF886P-201ENST00000450781 723 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC092155.2-201ENST00000454675 477 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC009127.1-201ENST00000467090 155 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC134050.1-201ENST00000495088 933 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 RPS4XP20-201ENST00000505751 772 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 Y_RNA.688-201ENST00000516565 95 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC100784.1-201ENST00000522790 310 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 MTCO3P15-201ENST00000526563 574 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM38O00635 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM38O00635 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC007599.1-201ENST00000568688 1174 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM38O00635 MIR4666A-201ENST00000580160 79 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 PIGPP4-201ENST00000584447 307 ntBASIC5.25□□□□□ -1.57
TRIM38O00635 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM38O00635 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms