Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP002782.1-201ENST00000623107 614 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 CDRT1-208ENST00000630868 794 ntBASIC5.4□□□□□ -1.54
FOXN3O00409 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXN3O00409 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.4□□□□□ -1.54
FOXN3O00409 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXN3O00409 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
FOXN3O00409 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.4□□□□□ -1.55
FOXN3O00409 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXN3O00409 AL731532.2-201ENST00000623542 1953 ntBASIC5.4□□□□□ -1.55
FOXN3O00409 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXN3O00409 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXN3O00409 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXN3O00409 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 AL031595.2-201ENST00000624215 19071 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 AP000756.2-201ENST00000624168 2567 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 RN7SKP74-201ENST00000362849 309 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 snoZ40.1-201ENST00000364540 72 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 SNORA40.2-201ENST00000390847 128 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 RNU2-6P-201ENST00000411404 190 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 RPS24P7-201ENST00000416921 246 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC073136.2-201ENST00000417282 849 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 QRSL1P2-201ENST00000418582 964 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC099336.2-201ENST00000422457 254 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 RPL21P43-201ENST00000425440 472 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 RPS26P47-201ENST00000427219 348 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 MTCO1P3-201ENST00000429327 192 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 HMGB1P16-201ENST00000447155 540 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 IGHV5-78-201ENST00000450948 295 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 EIF4A1P11-201ENST00000451239 222 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC099560.2-201ENST00000457554 255 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 RN7SL222P-201ENST00000476452 299 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC015724.1-201ENST00000478577 156 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 NIP7P2-201ENST00000485801 544 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 COX6B1P2-201ENST00000489624 230 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 BOLA3P3-201ENST00000505182 232 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 AC008562.1-201ENST00000521763 330 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 RPL23AP53-201ENST00000521854 457 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 AP006245.2-201ENST00000522004 300 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 OR4A2P-201ENST00000527276 913 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 DUXAP5-201ENST00000529668 529 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 AP001269.3-201ENST00000588718 329 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC068790.7-201ENST00000602347 528 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC025811.1-201ENST00000604312 472 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC025588.2-201ENST00000604851 466 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC131238.1-201ENST00000617135 328 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC120349.3-201ENST00000624377 529 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXN3O00409 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
FOXN3O00409 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXN3O00409 DCAF13P3-201ENST00000561147 1334 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXN3O00409 AC010329.2-201ENST00000595195 2737 ntBASIC5.39□□□□□ -1.55
FOXN3O00409 ASNSP1-201ENST00000518311 1939 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.38□□□□□ -1.55
FOXN3O00409 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 AL034370.1-201ENST00000397254 1590 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms