Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 MUC2-202ENST00000613187 4845 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 OR56B2P-201ENST00000317102 954 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL445183.3-201ENST00000414168 502 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL121878.1-201ENST00000418638 859 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 OR6C64P-201ENST00000419708 825 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 LYPLA1P1-201ENST00000434514 622 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 RPS26P2-201ENST00000440331 348 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL357520.1-201ENST00000441557 453 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 HMGN1P15-201ENST00000513870 295 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC063949.1-201ENST00000552900 865 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 MIR4480-201ENST00000582492 71 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC068790.7-201ENST00000602347 528 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 COX6CP4-201ENST00000605798 228 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 OR7A19P-201ENST00000608051 733 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL049539.1-201ENST00000611964 459 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AL590396.2-201ENST00000636511 1041 ntBASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
BLOC1S4Q9NUP1 AC107068.1-201ENST00000563286 4218 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 KARSP3-201ENST00000571212 1504 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 RNU1-87P-201ENST00000363727 170 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 MIR525-201ENST00000384978 85 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 DNAJC19P6-201ENST00000401853 280 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 RN7SKP267-201ENST00000410381 285 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 RPL21P43-201ENST00000425440 472 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 ELOCP11-201ENST00000436690 332 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 FABP5P3-201ENST00000437960 408 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC006994.1-201ENST00000438212 839 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC002542.1-201ENST00000440683 193 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC073648.4-201ENST00000442655 781 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 ELOCP16-201ENST00000444494 332 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AL096803.2-201ENST00000450032 677 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 GTF2IP12-201ENST00000456547 356 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 RPS17P11-201ENST00000474297 293 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC104629.1-201ENST00000494226 508 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 RPL30P11-201ENST00000495304 339 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC007016.1-201ENST00000512110 244 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 RNU5A-7P-201ENST00000515979 116 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 PDCD5P1-201ENST00000543528 309 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 OR4U1P-201ENST00000554958 912 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC243756.2-201ENST00000618406 463 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 AL669942.2-201ENST00000620352 697 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 NSRP1P1-201ENST00000444067 1693 ntBASIC5.18□□□□□ -1.58
BLOC1S4Q9NUP1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms