Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC7Q96M83 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC7Q96M83 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC7Q96M83 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC7Q96M83 ERCC6-202ENST00000374127 1782 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 RNA5SP130-201ENST00000364431 114 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 AL607077.1-201ENST00000401718 499 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 RN7SKP182-201ENST00000410772 298 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 KCTD9P2-201ENST00000512203 1013 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 AL161912.3-201ENST00000605404 628 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 AL451086.1-201ENST00000605596 223 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 MIR6875-201ENST00000617506 72 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 MIR7702-201ENST00000621931 59 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 AC079298.2-201ENST00000623885 459 ntBASIC5.78□□□□□ -1.48
CCDC7Q96M83 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC7Q96M83 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC116667.1-201ENST00000604855 2072 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC7Q96M83 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC7Q96M83 VPS35P1-201ENST00000563400 1518 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 SAMMSON-213ENST00000641336 1521 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC7Q96M83 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC013410.1-201ENST00000436223 1232 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC006011.1-201ENST00000442758 349 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 RPL36AP13-201ENST00000457490 317 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 RN7SL585P-201ENST00000470538 280 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 MTND1P6-201ENST00000523621 946 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC011270.1-201ENST00000558606 583 ntBASIC5.77□□□□□ -1.49
CCDC7Q96M83 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC7Q96M83 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC7Q96M83 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC7Q96M83 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC7Q96M83 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC7Q96M83 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC7Q96M83 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC7Q96M83 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC7Q96M83 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC7Q96M83 MIR513A2-201ENST00000385249 127 ntBASIC5.76□□□□□ -1.49
CCDC7Q96M83 RPL7P2-201ENST00000427639 268 ntBASIC5.76□□□□□ -1.49
CCDC7Q96M83 HMGB3P5-201ENST00000428894 612 ntBASIC5.76□□□□□ -1.49
CCDC7Q96M83 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC7Q96M83 EIF2S2P5-201ENST00000457635 968 ntBASIC5.76□□□□□ -1.49
CCDC7Q96M83 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC7Q96M83 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC7Q96M83 DYNLL1P4-201ENST00000549314 266 ntBASIC5.76□□□□□ -1.49
CCDC7Q96M83 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
CCDC7Q96M83 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 ENSAP1-201ENST00000392855 326 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC007389.2-201ENST00000434630 306 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AL356276.2-201ENST00000435919 558 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 ARAFP2-201ENST00000440565 559 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC146944.2-203ENST00000502493 354 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 FTH1P21-201ENST00000512179 511 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 NPM1P41-201ENST00000512920 831 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC139495.1-202ENST00000513164 354 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 SETP1-201ENST00000556014 845 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC7Q96M83 DPRXP4-201ENST00000578053 568 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 QTRT1P1-201ENST00000604344 1078 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AC095038.2-201ENST00000621464 1070 ntBASIC5.75□□□□□ -1.49
CCDC7Q96M83 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC7Q96M83 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms