Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AC005229.2-201ENST00000456995 399 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 RPS18P6-201ENST00000476880 458 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 ENPP7P11-201ENST00000505915 627 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 HIGD1AP14-201ENST00000507617 282 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 RPS27AP18-201ENST00000515536 459 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 RNA5SP92-201ENST00000516437 110 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.65□□□□□ -1.5
HPS3Q969F9 ZNF321P-202ENST00000550843 495 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AADACP1-206ENST00000561502 1193 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AC009094.1-201ENST00000564443 426 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AC009852.2-201ENST00000567898 485 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 MRPS35P3-201ENST00000603189 709 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AP005137.2-201ENST00000609238 400 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AC018445.2-201ENST00000622987 260 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.65□□□□□ -1.51
HPS3Q969F9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS3Q969F9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.65□□□□□ -1.51
HPS3Q969F9 AC025263.3-201ENST00000622965 1396 ntBASIC5.65□□□□□ -1.51
HPS3Q969F9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
HPS3Q969F9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.65□□□□□ -1.51
HPS3Q969F9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HPS3Q969F9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.64□□□□□ -1.51
HPS3Q969F9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RNU6-1214P-201ENST00000363650 109 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RN7SKP114-201ENST00000410327 279 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RNU6-575P-201ENST00000411326 105 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS3Q969F9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.64□□□□□ -1.51
HPS3Q969F9 RHOT1P3-201ENST00000436571 331 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RPL34P20-201ENST00000442771 351 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 EXTL2P1-201ENST00000446218 416 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RN7SL172P-201ENST00000460535 303 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC079841.1-201ENST00000481228 950 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 RN7SKP283-201ENST00000517197 270 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC008562.1-201ENST00000521763 330 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 OR4A2P-201ENST00000527276 913 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AP001317.1-201ENST00000531194 960 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC092747.2-201ENST00000545069 983 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC044860.2-201ENST00000561005 179 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS3Q969F9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 BNIP3P41-202ENST00000616656 861 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC037198.3-201ENST00000616754 526 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 SAMMSON-227ENST00000642114 1199 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.64□□□□□ -1.51
HPS3Q969F9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HPS3Q969F9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS3Q969F9 AC092079.1-201ENST00000558620 1985 ntBASIC5.64□□□□□ -1.51
HPS3Q969F9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.64□□□□□ -1.51
HPS3Q969F9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS3Q969F9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HPS3Q969F9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HPS3Q969F9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HPS3Q969F9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HPS3Q969F9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.63□□□□□ -1.51
HPS3Q969F9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.63□□□□□ -1.51
HPS3Q969F9 AC119744.1-201ENST00000454746 1715 ntBASIC5.63□□□□□ -1.51
HPS3Q969F9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms