Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AC108064.1-201ENST00000513791 460 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL049874.4-201ENST00000557593 255 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AC006116.5-201ENST00000591936 559 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AC034236.3-201ENST00000605999 461 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 Z98200.1-201ENST00000607298 470 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL392048.1-201ENST00000613946 534 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL021997.2-201ENST00000615674 271 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL356274.1-201ENST00000617064 410 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 MTCO1P8-201ENST00000416914 1523 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 RNU6-386P-201ENST00000362650 107 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 RNU6-891P-201ENST00000384280 111 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 RN7SKP33-201ENST00000410942 340 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 GTF3AP5-201ENST00000442645 697 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AC006326.1-201ENST00000445465 787 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AL359073.1-201ENST00000448036 403 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 OR8R1P-201ENST00000543943 764 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 MTATP6P25-201ENST00000574491 261 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AC245389.2-201ENST00000616023 576 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AC242843.1-201ENST00000618702 573 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 SPATA2P1-201ENST00000431223 2055 ntBASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM1Q2M3G4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 AP000542.2-201ENST00000623199 6179 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 RNU6-146P-201ENST00000384602 108 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 RPL36AP36-201ENST00000418616 301 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 RPL23AP2-201ENST00000471227 466 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 AC020593.1-201ENST00000507399 299 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 AC091905.2-201ENST00000623143 306 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 ASNSP1-204ENST00000641977 1664 ntBASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM1Q2M3G4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AL118496.1-201ENST00000440201 1812 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 PPIAP31-201ENST00000405422 495 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 RCC2P2-201ENST00000422174 918 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 HSFY6P-201ENST00000445573 403 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC044797.1-201ENST00000445744 679 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 DDX39BP2-208ENST00000453923 258 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC105918.1-201ENST00000474399 838 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms