Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ARL2BPP6-201ENST00000512757 439 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 RN7SKP60-201ENST00000516985 239 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 MTCYBP19-201ENST00000517463 1124 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 IGKV2D-23-201ENST00000518179 286 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.34□□□□□ -1.87
SSBP1Q04837 IGKV3D-34-201ENST00000522638 302 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 AC012146.2-201ENST00000576545 416 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 MIR4646-201ENST00000580775 63 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSBP1Q04837 AC087468.1-201ENST00000604365 630 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.34□□□□□ -1.87
SSBP1Q04837 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.34□□□□□ -1.87
SSBP1Q04837 AC068870.2-201ENST00000620635 389 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 AC021106.3-201ENST00000623925 531 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 OR6C71P-202ENST00000641886 1107 ntBASIC3.34□□□□□ -1.87
SSBP1Q04837 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SSBP1Q04837 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSBP1Q04837 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSBP1Q04837 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.34□□□□□ -1.88
SSBP1Q04837 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SSBP1Q04837 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.34□□□□□ -1.88
SSBP1Q04837 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.34□□□□□ -1.88
SSBP1Q04837 AC093311.1-201ENST00000506586 2021 ntBASIC3.34□□□□□ -1.88
SSBP1Q04837 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSBP1Q04837 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSBP1Q04837 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSBP1Q04837 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSBP1Q04837 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSBP1Q04837 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.33□□□□□ -1.88
SSBP1Q04837 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSBP1Q04837 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC3.33□□□□□ -1.88
SSBP1Q04837 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSBP1Q04837 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSBP1Q04837 RPL23AP59-201ENST00000399415 461 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AL035696.2-201ENST00000407941 709 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 RNU4-25P-201ENST00000410569 230 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC114814.2-201ENST00000419195 485 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.33□□□□□ -1.88
SSBP1Q04837 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.33□□□□□ -1.88
SSBP1Q04837 BTG3P1-201ENST00000435859 716 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AL138878.2-201ENST00000440581 1241 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 TRBV12-2-201ENST00000489763 344 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC008958.1-201ENST00000511047 682 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.33□□□□□ -1.88
SSBP1Q04837 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.33□□□□□ -1.88
SSBP1Q04837 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.33□□□□□ -1.88
SSBP1Q04837 AC135001.1-201ENST00000544546 283 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC008147.3-201ENST00000548666 354 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.33□□□□□ -1.88
SSBP1Q04837 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.33□□□□□ -1.88
SSBP1Q04837 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.33□□□□□ -1.88
SSBP1Q04837 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.33□□□□□ -1.88
SSBP1Q04837 ELOCP28-201ENST00000590044 317 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC068790.7-201ENST00000602347 528 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 RNU6-84P-201ENST00000607737 102 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 MIR7151-201ENST00000617477 60 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC009704.2-201ENST00000618739 483 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC002044.3-201ENST00000623314 541 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.33□□□□□ -1.88
SSBP1Q04837 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.33□□□□□ -1.88
SSBP1Q04837 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSBP1Q04837 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SSBP1Q04837 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSBP1Q04837 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
SSBP1Q04837 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.32□□□□□ -1.88
SSBP1Q04837 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP1Q04837 SNORA68.2-201ENST00000391263 128 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.32□□□□□ -1.88
SSBP1Q04837 FTH1P16-201ENST00000435241 552 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AC009963.2-201ENST00000453431 138 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AC004801.2-202ENST00000463559 283 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 RN7SL481P-201ENST00000477764 299 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 RPL23AP73-201ENST00000492507 471 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AC008489.1-201ENST00000524271 483 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP1Q04837 RFPL1S-203ENST00000539579 330 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 AC091516.1-201ENST00000549191 703 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP1Q04837 AC090948.1-201ENST00000607464 549 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 RMST_8.1-201ENST00000610287 165 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 MIR4302-201ENST00000638058 60 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SSBP1Q04837 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SSBP1Q04837 DDX18P3-201ENST00000404856 2007 ntBASIC3.32□□□□□ -1.88
SSBP1Q04837 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSBP1Q04837 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.32□□□□□ -1.88
SSBP1Q04837 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.32□□□□□ -1.88
SSBP1Q04837 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC006504.1-201ENST00000562493 3666 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP1Q04837 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP1Q04837 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP1Q04837 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms