Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ACLYP53396 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ACLYP53396 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
ACLYP53396 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 SAMMSON-213ENST00000641336 1521 ntBASIC4.73□□□□□ -1.65
ACLYP53396 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 RNU6-697P-201ENST00000363348 107 ntBASIC4.73□□□□□ -1.65
ACLYP53396 RNU1-83P-201ENST00000363426 164 ntBASIC4.73□□□□□ -1.65
ACLYP53396 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 OR51A6P-201ENST00000418680 1004 ntBASIC4.73□□□□□ -1.65
ACLYP53396 OR6C64P-201ENST00000419708 825 ntBASIC4.73□□□□□ -1.65
ACLYP53396 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.73□□□□□ -1.65
ACLYP53396 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.73□□□□□ -1.65
ACLYP53396 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
ACLYP53396 RPL23AP25-201ENST00000430973 463 ntBASIC4.73□□□□□ -1.65
ACLYP53396 AL445584.1-201ENST00000431451 330 ntBASIC4.73□□□□□ -1.65
ACLYP53396 CEACAMP1-201ENST00000434624 1035 ntBASIC4.73□□□□□ -1.65
ACLYP53396 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.73□□□□□ -1.65
ACLYP53396 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 AL591473.1-201ENST00000464297 313 ntBASIC4.73□□□□□ -1.65
ACLYP53396 RPL7P22-201ENST00000466005 733 ntBASIC4.73□□□□□ -1.65
ACLYP53396 SNORD116-30-201ENST00000516468 85 ntBASIC4.73□□□□□ -1.65
ACLYP53396 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.73□□□□□ -1.65
ACLYP53396 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.73□□□□□ -1.65
ACLYP53396 HNRNPCP4-201ENST00000571636 900 ntBASIC4.73□□□□□ -1.65
ACLYP53396 AL606490.9-201ENST00000603331 271 ntBASIC4.73□□□□□ -1.65
ACLYP53396 AL160290.3-201ENST00000604869 165 ntBASIC4.73□□□□□ -1.65
ACLYP53396 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
ACLYP53396 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
ACLYP53396 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACLYP53396 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ACLYP53396 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ACLYP53396 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.73□□□□□ -1.65
ACLYP53396 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ACLYP53396 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.72□□□□□ -1.65
ACLYP53396 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.72□□□□□ -1.65
ACLYP53396 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ACLYP53396 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ACLYP53396 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
ACLYP53396 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
ACLYP53396 FAM91A3P-201ENST00000456826 2544 ntBASIC4.72□□□□□ -1.65
ACLYP53396 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
ACLYP53396 OR11H4-201ENST00000315409 1082 ntBASIC4.72□□□□□ -1.65
ACLYP53396 RNA5SP151-201ENST00000365632 117 ntBASIC4.72□□□□□ -1.65
ACLYP53396 RNU6-761P-201ENST00000384148 107 ntBASIC4.72□□□□□ -1.65
ACLYP53396 AL592291.1-201ENST00000403830 352 ntBASIC4.72□□□□□ -1.65
ACLYP53396 OR2AH1P-201ENST00000425717 928 ntBASIC4.72□□□□□ -1.65
ACLYP53396 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.72□□□□□ -1.65
ACLYP53396 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.72□□□□□ -1.65
ACLYP53396 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.72□□□□□ -1.65
ACLYP53396 AL133547.1-201ENST00000448546 220 ntBASIC4.72□□□□□ -1.65
ACLYP53396 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.72□□□□□ -1.65
ACLYP53396 HSPE1P22-201ENST00000456856 327 ntBASIC4.72□□□□□ -1.65
ACLYP53396 EIF2S2P5-201ENST00000457635 968 ntBASIC4.72□□□□□ -1.65
ACLYP53396 RNA5SP246-201ENST00000458909 119 ntBASIC4.72□□□□□ -1.65
ACLYP53396 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.72□□□□□ -1.65
ACLYP53396 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.72□□□□□ -1.65
ACLYP53396 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.72□□□□□ -1.65
ACLYP53396 AL352979.3-201ENST00000553515 247 ntBASIC4.72□□□□□ -1.65
ACLYP53396 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.72□□□□□ -1.65
ACLYP53396 MIR5685-201ENST00000579080 79 ntBASIC4.72□□□□□ -1.65
ACLYP53396 HMGB2P1-201ENST00000591146 634 ntBASIC4.72□□□□□ -1.65
ACLYP53396 COX6CP4-201ENST00000605798 228 ntBASIC4.72□□□□□ -1.65
ACLYP53396 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.72□□□□□ -1.65
ACLYP53396 AC012442.3-202ENST00000636742 206 ntBASIC4.72□□□□□ -1.65
ACLYP53396 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ACLYP53396 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.72□□□□□ -1.65
ACLYP53396 AC139713.2-215ENST00000641428 5037 ntBASIC4.72□□□□□ -1.65
ACLYP53396 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ACLYP53396 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.72□□□□□ -1.65
ACLYP53396 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ACLYP53396 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.71□□□□□ -1.65
ACLYP53396 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ACLYP53396 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
ACLYP53396 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.71□□□□□ -1.65
ACLYP53396 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ACLYP53396 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ACLYP53396 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ACLYP53396 RNA5SP307-201ENST00000362863 116 ntBASIC4.71□□□□□ -1.66
ACLYP53396 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ACLYP53396 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.71□□□□□ -1.66
ACLYP53396 SNORA74C-2-201ENST00000411179 201 ntBASIC4.71□□□□□ -1.66
ACLYP53396 AC115285.1-201ENST00000424879 736 ntBASIC4.71□□□□□ -1.66
ACLYP53396 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
ACLYP53396 AL121578.1-201ENST00000428051 892 ntBASIC4.71□□□□□ -1.66
ACLYP53396 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.71□□□□□ -1.66
ACLYP53396 PPIAP13-201ENST00000434706 478 ntBASIC4.71□□□□□ -1.66
ACLYP53396 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
ACLYP53396 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.71□□□□□ -1.66
ACLYP53396 OR6C72P-201ENST00000451403 892 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms