Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 EIF4BP4-201ENST00000441847 1780 ntBASIC7.94□□□□□ -1.14
NUBP1P53384 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.94□□□□□ -1.14
NUBP1P53384 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NUBP1P53384 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.94□□□□□ -1.14
NUBP1P53384 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NUBP1P53384 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NUBP1P53384 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NUBP1P53384 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NUBP1P53384 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC7.94□□□□□ -1.14
NUBP1P53384 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.94□□□□□ -1.14
NUBP1P53384 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.93□□□□□ -1.14
NUBP1P53384 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.93□□□□□ -1.14
NUBP1P53384 AC011297.1-201ENST00000620503 2110 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 GNL2P1-201ENST00000451274 2190 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
NUBP1P53384 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 Y_RNA.44-201ENST00000362676 108 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 RNU6-1243P-201ENST00000364028 107 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 Y_RNA.383-201ENST00000383855 97 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 RNU6ATAC15P-201ENST00000408279 121 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 Y_RNA.602-201ENST00000410535 92 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AC017079.2-201ENST00000416102 485 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 RPS23P10-201ENST00000416185 486 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 RPS4XP5-201ENST00000419038 768 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 AL160275.3-201ENST00000423876 471 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 RPL7AP14-201ENST00000424041 802 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 LINC00328-2P-201ENST00000436585 219 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AL138899.2-201ENST00000439139 499 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 RPLP0P1-201ENST00000457002 361 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 HMGN2P13-201ENST00000476476 274 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AC005017.1-201ENST00000482002 490 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 AC109479.2-201ENST00000517842 174 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC7.93□□□□□ -1.14
NUBP1P53384 AC087369.1-201ENST00000520775 996 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 MRPS18CP4-201ENST00000535821 231 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AC092470.1-201ENST00000546187 132 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AC027288.2-201ENST00000553028 243 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AL442163.3-201ENST00000554110 156 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.93□□□□□ -1.14
NUBP1P53384 AC005070.2-201ENST00000604391 260 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC7.93□□□□□ -1.14
NUBP1P53384 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.93□□□□□ -1.14
NUBP1P53384 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
NUBP1P53384 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NUBP1P53384 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NUBP1P53384 AC009090.4-201ENST00000623921 3691 ntBASIC7.92□□□□□ -1.14
NUBP1P53384 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NUBP1P53384 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NUBP1P53384 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NUBP1P53384 HSPA8P11-201ENST00000508840 1898 ntBASIC7.92□□□□□ -1.14
NUBP1P53384 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
NUBP1P53384 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.92□□□□□ -1.14
NUBP1P53384 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NUBP1P53384 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NUBP1P53384 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NUBP1P53384 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC7.92□□□□□ -1.14
NUBP1P53384 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NUBP1P53384 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
NUBP1P53384 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms