Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TLK1P1-201ENST00000456760 2440 ntBASIC4.57□□□□□ -1.68
PDX1P52945 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDX1P52945 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.57□□□□□ -1.68
PDX1P52945 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDX1P52945 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 HSPA8P17-201ENST00000427029 1382 ntBASIC4.56□□□□□ -1.68
PDX1P52945 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
PDX1P52945 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 Y_RNA.126-201ENST00000363382 111 ntBASIC4.56□□□□□ -1.68
PDX1P52945 RNU6-666P-201ENST00000363499 107 ntBASIC4.56□□□□□ -1.68
PDX1P52945 RNU6-468P-201ENST00000384003 109 ntBASIC4.56□□□□□ -1.68
PDX1P52945 RNU6-452P-201ENST00000384406 107 ntBASIC4.56□□□□□ -1.68
PDX1P52945 RNU1-82P-201ENST00000390851 165 ntBASIC4.56□□□□□ -1.68
PDX1P52945 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 OR51B3P-201ENST00000412287 913 ntBASIC4.56□□□□□ -1.68
PDX1P52945 OR51A6P-201ENST00000418680 1004 ntBASIC4.56□□□□□ -1.68
PDX1P52945 UQCRBP1-201ENST00000421129 336 ntBASIC4.56□□□□□ -1.68
PDX1P52945 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 GTF2IP2-201ENST00000424290 697 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AC013262.1-201ENST00000426710 252 ntBASIC4.56□□□□□ -1.68
PDX1P52945 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 RPL12P28-201ENST00000430852 489 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AC092162.1-201ENST00000432828 434 ntBASIC4.56□□□□□ -1.68
PDX1P52945 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 AC097499.1-201ENST00000444277 208 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 RN7SL517P-201ENST00000462240 305 ntBASIC4.56□□□□□ -1.68
PDX1P52945 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 RN7SL41P-201ENST00000476144 297 ntBASIC4.56□□□□□ -1.68
PDX1P52945 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 RN7SL558P-201ENST00000497468 299 ntBASIC4.56□□□□□ -1.68
PDX1P52945 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.56□□□□□ -1.68
PDX1P52945 RNA5SP303-201ENST00000516192 130 ntBASIC4.56□□□□□ -1.68
PDX1P52945 RNU1-6P-201ENST00000516290 144 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.56□□□□□ -1.68
PDX1P52945 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 AC008083.2-201ENST00000546707 476 ntBASIC4.56□□□□□ -1.68
PDX1P52945 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.56□□□□□ -1.68
PDX1P52945 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 AC093591.2-201ENST00000565254 3843 ntBASIC4.56□□□□□ -1.68
PDX1P52945 MIR4675-201ENST00000577898 77 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AP005262.1-201ENST00000582646 997 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.56□□□□□ -1.68
PDX1P52945 AC008782.1-201ENST00000603386 430 ntBASIC4.56□□□□□ -1.68
PDX1P52945 AC011472.4-201ENST00000615848 491 ntBASIC4.56□□□□□ -1.68
PDX1P52945 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDX1P52945 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PDX1P52945 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.56□□□□□ -1.68
PDX1P52945 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.56□□□□□ -1.68
PDX1P52945 VN2R3P-201ENST00000422626 1412 ntBASIC4.55□□□□□ -1.68
PDX1P52945 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 OR56B2P-202ENST00000641377 2453 ntBASIC4.55□□□□□ -1.68
PDX1P52945 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
PDX1P52945 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 AC108751.5-201ENST00000492880 1336 ntBASIC4.55□□□□□ -1.68
PDX1P52945 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDX1P52945 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 RNU6-185P-201ENST00000384421 107 ntBASIC4.55□□□□□ -1.68
PDX1P52945 RNU6-1000P-201ENST00000391066 106 ntBASIC4.55□□□□□ -1.68
PDX1P52945 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDX1P52945 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.55□□□□□ -1.68
PDX1P52945 HSFY1P1-201ENST00000423928 1178 ntBASIC4.55□□□□□ -1.68
PDX1P52945 FO393419.3-201ENST00000428741 282 ntBASIC4.55□□□□□ -1.68
PDX1P52945 RPS17P8-201ENST00000434525 335 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 RPL7P33-201ENST00000444159 742 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.55□□□□□ -1.68
PDX1P52945 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.55□□□□□ -1.68
PDX1P52945 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.55□□□□□ -1.68
PDX1P52945 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.55□□□□□ -1.68
PDX1P52945 AP001781.1-201ENST00000530977 207 ntBASIC4.55□□□□□ -1.68
PDX1P52945 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.55□□□□□ -1.68
PDX1P52945 AL358913.1-201ENST00000554342 121 ntBASIC4.55□□□□□ -1.68
PDX1P52945 CD24P2-201ENST00000565486 219 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.55□□□□□ -1.68
PDX1P52945 AC124283.4-201ENST00000581815 456 ntBASIC4.55□□□□□ -1.68
PDX1P52945 RN7SL622P-201ENST00000585292 275 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.55□□□□□ -1.68
PDX1P52945 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.55□□□□□ -1.68
PDX1P52945 BNIP3P40-201ENST00000596017 556 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.55□□□□□ -1.68
PDX1P52945 AC103792.1-201ENST00000603591 919 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms