Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC13P31276 AL645927.2-201ENST00000618350 349 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC13P31276 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC13P31276 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC13P31276 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC13P31276 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC13P31276 GTF2H2B-203ENST00000508065 1432 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AL137100.1-201ENST00000556703 1620 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC13P31276 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC13P31276 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 ZNF90P1-201ENST00000480493 1951 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC134882.1-201ENST00000603738 1676 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HOXC13P31276 NCLP2-201ENST00000416078 1462 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 SNORA70F-201ENST00000384142 135 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AL353692.2-201ENST00000407054 335 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 RNU4-25P-201ENST00000410569 230 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 CKS1BP6-201ENST00000424932 240 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 CBX1P1-201ENST00000440184 427 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 YWHAZP2-201ENST00000440317 728 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 RHEBP2-201ENST00000450289 600 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AL645939.1-201ENST00000453429 797 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 HMGB1P21-201ENST00000502313 581 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 PRELID3BP7-201ENST00000503606 469 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 RNA5SP497-201ENST00000516081 97 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
HOXC13P31276 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC13P31276 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC13P31276 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 MIR5699-201ENST00000578903 90 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC13P31276 AC022726.1-201ENST00000587475 207 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC115085.1-201ENST00000588924 229 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 RPL12P25-202ENST00000598100 674 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC073091.2-201ENST00000603205 907 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC005014.3-201ENST00000605985 190 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC004775.1-201ENST00000607389 753 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AL162574.2-201ENST00000614618 657 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 MIR1264-201ENST00000616374 69 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 U6.48-201ENST00000618523 106 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC13P31276 AC067852.7-201ENST00000623270 535 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 AC090617.9-201ENST00000623751 147 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 TLK1P1-201ENST00000456760 2440 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 ZFRP1-201ENST00000457579 2970 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC13P31276 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HOXC13P31276 DDX18P5-201ENST00000534547 1306 ntBASIC4.97□□□□□ -1.61
HOXC13P31276 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC13P31276 AL022311.1-201ENST00000623726 19416 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 OR10J6P-201ENST00000289731 930 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC13P31276 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC13P31276 BX510359.2-201ENST00000417920 305 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC13P31276 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC13P31276 RPL17P36-201ENST00000420302 549 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXC13P31276 RGS17P1-201ENST00000423358 553 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 EIF4HP2-201ENST00000424380 563 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 ELOCP6-201ENST00000429066 328 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 RPS17P8-201ENST00000434525 335 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 CEACAMP1-201ENST00000434624 1035 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 AL451139.1-201ENST00000434718 346 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC13P31276 MTND4P15-201ENST00000437913 1033 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC13P31276 ACTR3P2-201ENST00000439585 1257 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 ARL2BPP10-201ENST00000446487 531 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 RPS5P7-201ENST00000456664 608 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 ELOCP12-201ENST00000458706 328 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC13P31276 AC025459.1-201ENST00000504072 156 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXC13P31276 HAUS1P3-201ENST00000523909 662 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 AC093014.1-201ENST00000548926 724 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC13P31276 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXC13P31276 MTND4LP24-201ENST00000572277 291 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 AC026979.4-201ENST00000606555 645 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 AL035461.2-201ENST00000619201 524 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC13P31276 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HOXC13P31276 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC13P31276 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC13P31276 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXC13P31276 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC13P31276 DHX40P1-201ENST00000588725 1412 ntBASIC4.96□□□□□ -1.62
HOXC13P31276 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
HOXC13P31276 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms