Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.48□□□□□ -1.53
ZBED1O96006 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.48□□□□□ -1.53
ZBED1O96006 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZBED1O96006 AC022662.1-201ENST00000580252 331 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 AP005262.1-201ENST00000582646 997 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.48□□□□□ -1.53
ZBED1O96006 PRPF19P1-201ENST00000584766 898 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 VN1R78P-201ENST00000597393 564 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 AC008536.1-201ENST00000602872 669 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 AL390816.3-201ENST00000604527 1066 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 AP003973.1-201ENST00000604639 691 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.48□□□□□ -1.53
ZBED1O96006 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ZBED1O96006 AC016769.4-201ENST00000616893 535 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.48□□□□□ -1.53
ZBED1O96006 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZBED1O96006 AC022509.4-201ENST00000621404 572 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.48□□□□□ -1.53
ZBED1O96006 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.48□□□□□ -1.53
ZBED1O96006 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
ZBED1O96006 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ZBED1O96006 AC011755.1-201ENST00000623763 2049 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZBED1O96006 PANDAR-201ENST00000629595 1506 ntBASIC5.48□□□□□ -1.53
ZBED1O96006 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.48□□□□□ -1.53
ZBED1O96006 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 Z99496.1-201ENST00000469424 1477 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZBED1O96006 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 MIR1182-201ENST00000408363 97 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AL450992.3-201ENST00000413192 568 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.47□□□□□ -1.53
ZBED1O96006 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 PAICSP7-201ENST00000419829 962 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 GTF2IP7-202ENST00000436677 309 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.47□□□□□ -1.53
ZBED1O96006 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 AL591363.1-201ENST00000450091 483 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AC079776.3-201ENST00000450665 370 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.47□□□□□ -1.53
ZBED1O96006 PPIAP21-201ENST00000464473 501 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.47□□□□□ -1.53
ZBED1O96006 RN7SL814P-201ENST00000487715 300 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AC091951.3-201ENST00000504093 246 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.47□□□□□ -1.53
ZBED1O96006 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 AC016559.2-201ENST00000510759 359 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 SNORA3.4-201ENST00000515969 96 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.47□□□□□ -1.53
ZBED1O96006 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.47□□□□□ -1.53
ZBED1O96006 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 MRPS35P3-201ENST00000603189 709 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AC092106.3-201ENST00000611308 722 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AL121612.2-201ENST00000612261 482 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AL139407.1-201ENST00000613826 1175 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AP000484.1-201ENST00000620067 1252 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 MIR6839-201ENST00000620425 113 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 AC099494.2-201ENST00000623371 978 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.47□□□□□ -1.53
ZBED1O96006 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZBED1O96006 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.47□□□□□ -1.53
ZBED1O96006 AC109780.1-201ENST00000451768 1344 ntBASIC5.47□□□□□ -1.53
ZBED1O96006 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.46□□□□□ -1.53
ZBED1O96006 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZBED1O96006 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
ZBED1O96006 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ZBED1O96006 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
ZBED1O96006 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ZBED1O96006 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZBED1O96006 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.46□□□□□ -1.54
ZBED1O96006 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZBED1O96006 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZBED1O96006 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.46□□□□□ -1.54
ZBED1O96006 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.46□□□□□ -1.54
ZBED1O96006 U8.4-201ENST00000363626 134 ntBASIC5.46□□□□□ -1.54
ZBED1O96006 RNU6-619P-201ENST00000365146 108 ntBASIC5.46□□□□□ -1.54
ZBED1O96006 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZBED1O96006 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZBED1O96006 Y_RNA.465-201ENST00000384293 102 ntBASIC5.46□□□□□ -1.54
ZBED1O96006 AC119751.3-201ENST00000399720 670 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms