Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 GAPDHP58-201ENST00000438477 1006 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AL591503.2-201ENST00000442314 1005 ntBASIC5.19□□□□□ -1.58
PROM1O43490 FHP1-201ENST00000442741 703 ntBASIC5.19□□□□□ -1.58
PROM1O43490 TAF9P1-201ENST00000445421 515 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AL589765.3-201ENST00000446084 462 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 TAF9P2-201ENST00000454958 515 ntBASIC5.19□□□□□ -1.58
PROM1O43490 NDUFA12P1-201ENST00000455914 406 ntBASIC5.19□□□□□ -1.58
PROM1O43490 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.19□□□□□ -1.58
PROM1O43490 AC069304.1-201ENST00000491593 704 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC107401.1-201ENST00000503426 685 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC116353.3-201ENST00000511215 249 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC093755.1-201ENST00000512950 1023 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 AP000619.3-201ENST00000535634 1127 ntBASIC5.19□□□□□ -1.58
PROM1O43490 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PROM1O43490 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 AC044860.2-201ENST00000561005 179 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.19□□□□□ -1.58
PROM1O43490 AC015720.2-201ENST00000567709 334 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AP005403.1-201ENST00000579720 229 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC068790.7-201ENST00000602347 528 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 AC096553.1-201ENST00000605169 829 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC079395.2-201ENST00000610982 737 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AL118522.2-201ENST00000616045 615 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC121761.2-201ENST00000617300 689 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC118658.2-201ENST00000618697 459 ntBASIC5.19□□□□□ -1.58
PROM1O43490 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 AF001550.2-201ENST00000636643 217 ntBASIC5.19□□□□□ -1.58
PROM1O43490 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.19□□□□□ -1.58
PROM1O43490 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 CR381670.1-201ENST00000624291 1693 ntBASIC5.18□□□□□ -1.58
PROM1O43490 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 ECM1P2-201ENST00000503354 1577 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PROM1O43490 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 MIR525-201ENST00000384978 85 ntBASIC5.18□□□□□ -1.58
PROM1O43490 TAF9BP1-201ENST00000396646 746 ntBASIC5.18□□□□□ -1.58
PROM1O43490 RNU4-34P-201ENST00000410431 124 ntBASIC5.18□□□□□ -1.58
PROM1O43490 NPM1P4-201ENST00000414095 812 ntBASIC5.18□□□□□ -1.58
PROM1O43490 MTCO3P41-201ENST00000414801 328 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 AL139421.1-201ENST00000423010 169 ntBASIC5.18□□□□□ -1.58
PROM1O43490 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 NPM1P22-201ENST00000427761 952 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 AL353093.1-201ENST00000441292 436 ntBASIC5.18□□□□□ -1.58
PROM1O43490 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 RPS4XP12-201ENST00000461747 709 ntBASIC5.18□□□□□ -1.58
PROM1O43490 SIAH1P1-201ENST00000479411 923 ntBASIC5.18□□□□□ -1.58
PROM1O43490 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 OR5M14P-201ENST00000506803 618 ntBASIC5.18□□□□□ -1.58
PROM1O43490 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PROM1O43490 AL671862.1-201ENST00000515851 349 ntBASIC5.18□□□□□ -1.58
PROM1O43490 FTH1P11-201ENST00000517577 551 ntBASIC5.18□□□□□ -1.58
PROM1O43490 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.18□□□□□ -1.58
PROM1O43490 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.18□□□□□ -1.58
PROM1O43490 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.18□□□□□ -1.58
PROM1O43490 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PROM1O43490 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PROM1O43490 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.18□□□□□ -1.58
PROM1O43490 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.18□□□□□ -1.58
PROM1O43490 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms