Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RN7SKP92-201ENST00000517266 244 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC022882.1-201ENST00000532142 501 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC005868.1-201ENST00000536421 331 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 LSM3P2-201ENST00000551246 273 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC209154.1-201ENST00000582156 337 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC116447.1-201ENST00000613153 453 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC018926.1-201ENST00000616335 435 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AL022401.1-201ENST00000619498 108 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AP003400.6-201ENST00000624698 740 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC132825.7-201ENST00000638744 335 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC073869.10-201ENST00000642016 354 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 DDX18P5-201ENST00000534547 1306 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AL137100.1-201ENST00000556703 1620 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AL590290.1-201ENST00000405336 380 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC069282.1-201ENST00000411911 526 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 NPM1P24-201ENST00000428039 894 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC016831.4-201ENST00000438302 307 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 snoU13.1-201ENST00000459157 104 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC073358.1-201ENST00000505671 684 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC111000.3-201ENST00000508057 576 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 HPRT1P1-201ENST00000509498 657 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC243654.2-201ENST00000612843 443 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC073569.3-201ENST00000619055 682 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AC068880.4-201ENST00000623082 495 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 U6.107-201ENST00000637108 79 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 OR2L1P-202ENST00000641567 1023 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 Z98755.1-201ENST00000407015 1384 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AL034370.1-201ENST00000397254 1590 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 AL450326.2-201ENST00000421913 1962 ntBASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
NPIPA3F8WFD2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA3F8WFD2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA3F8WFD2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.34□□□□□ -1.72
NPIPA3F8WFD2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.72
NPIPA3F8WFD2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA3F8WFD2 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.72
NPIPA3F8WFD2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA3F8WFD2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NPIPA3F8WFD2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms