Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 RNU6-77P-201ENST00000410554 91 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 MCFD2P1-201ENST00000417812 300 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AL139148.1-201ENST00000427122 680 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 TXNP1-201ENST00000441872 371 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC007547.1-201ENST00000462177 490 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 HMGB1P28-201ENST00000507778 552 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 RNA5SP434-201ENST00000516647 121 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 RANP9-201ENST00000519957 271 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 SUB1P1-201ENST00000524415 382 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AL049870.4-201ENST00000555741 486 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 MTCO3P23-201ENST00000561363 289 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC018552.1-201ENST00000562099 811 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC097468.3-201ENST00000607956 456 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 MIR6793-201ENST00000612376 63 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC009161.2-201ENST00000624626 138 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 OR52K3P-202ENST00000641797 1729 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 XRCC6P5-201ENST00000435236 1795 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 MTND5P10-201ENST00000603719 1809 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC245505.2-201ENST00000553572 3055 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 MIR16-1-201ENST00000385271 89 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AL359634.1-202ENST00000404721 284 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AL356968.1-201ENST00000416622 474 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 TMBIM7P-201ENST00000418074 855 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 BX284632.2-201ENST00000421091 399 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC006335.2-201ENST00000437993 330 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 BNIP3P2-201ENST00000441221 577 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC104058.1-201ENST00000448028 297 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 RN7SL706P-201ENST00000460079 292 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 RPS4XP10-201ENST00000465034 731 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 OR2AO1P-201ENST00000476497 403 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 RPL7AP6-201ENST00000477943 801 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC139272.1-201ENST00000505516 640 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 POU5F1P7-201ENST00000508759 541 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC098591.2-201ENST00000510152 315 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 TTC39CP1-201ENST00000512513 755 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 HMGB1P19-201ENST00000517578 577 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 DEFB131D-201ENST00000526803 184 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AP000648.1-201ENST00000529682 397 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 OR5B10P-201ENST00000532869 642 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AL389895.1-201ENST00000554127 252 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 CYCSP2-201ENST00000558168 301 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 MIR4330-201ENST00000579077 105 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms