Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX3Q99909 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC008536.1-201ENST00000602872 669 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 MTATP6P2-201ENST00000603319 678 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AL162431.4-201ENST00000604674 411 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 uc_338.18-201ENST00000615451 175 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 AC243756.2-201ENST00000618406 463 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC020978.9-201ENST00000624380 1141 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 CDRT1-208ENST00000630868 794 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 LINC01739-205ENST00000641890 573 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.2□□□□□ -1.74
SSX3Q99909 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SSX3Q99909 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX3Q99909 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC011266.1-201ENST00000624119 3569 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX3Q99909 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SSX3Q99909 AC017007.4-201ENST00000503353 1352 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 SNORD56.4-201ENST00000363883 71 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX3Q99909 RNU6-481P-201ENST00000384194 107 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AL645733.1-201ENST00000402250 217 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 RNU2-6P-201ENST00000411404 190 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 HMGB3P31-201ENST00000413333 595 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AL445183.3-201ENST00000414168 502 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 EIF4A1P1-201ENST00000420241 934 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX3Q99909 AC124944.2-201ENST00000429866 1242 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 AC092647.2-201ENST00000452998 253 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 RN7SL189P-201ENST00000468631 289 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AC090114.3-201ENST00000479267 829 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 PRELID3BP7-201ENST00000503606 469 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 RN7SKP82-201ENST00000516786 223 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 RN7SKP147-201ENST00000517154 244 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 MYL12AP1-201ENST00000518490 515 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 COX6B1P6-201ENST00000522347 255 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AC090281.1-201ENST00000523019 276 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 OR4A46P-201ENST00000527255 933 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SSX3Q99909 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX3Q99909 MIR3908-201ENST00000579798 126 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX3Q99909 ELOCP28-201ENST00000590044 317 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 EIF3FP1-201ENST00000613970 806 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX3Q99909 AP002371.2-201ENST00000624450 503 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SSX3Q99909 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SSX3Q99909 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX3Q99909 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX3Q99909 AL049737.1-201ENST00000413920 1403 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX3Q99909 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 DCAF13P3-201ENST00000561147 1334 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 MFSD8-213ENST00000641134 1327 ntBASIC4.19□□□□□ -1.74
SSX3Q99909 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SSX3Q99909 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX3Q99909 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 AC131971.1-201ENST00000332881 1482 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC138393.1-206ENST00000540997 1886 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 SNORA63.3-201ENST00000362682 132 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 RNA5SP27-201ENST00000363839 119 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 RNU4-4P-201ENST00000364588 130 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX3Q99909 MIR124-3-201ENST00000384866 87 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SSX3Q99909 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SSX3Q99909 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms