Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AL096816.1-201ENST00000623300 2920 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC126773.4-201ENST00000612545 3043 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC007406.5-201ENST00000570140 3170 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 COL6A4P1-202ENST00000487147 4317 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 RNU6-450P-201ENST00000364654 107 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 SNORA75B-201ENST00000384053 137 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 MIR188-201ENST00000385034 86 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 RN7SKP216-201ENST00000411050 312 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 VDAC1P9-201ENST00000412766 841 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL121871.1-201ENST00000443413 436 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL590664.1-201ENST00000448065 339 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 RPS26P11-201ENST00000463445 348 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 RPS26P39-201ENST00000469206 341 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 RPS26P6-201ENST00000475156 348 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 HSPD1P15-201ENST00000505573 1122 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 RN7SKP2-201ENST00000517003 319 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC107934.1-201ENST00000522215 217 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC026458.1-201ENST00000564330 438 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 NPIPB1P-202ENST00000588786 828 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL513327.3-201ENST00000602618 469 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 AL391813.2-201ENST00000609113 322 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 AC018926.3-201ENST00000618841 406 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 MIR6730-201ENST00000622213 67 ntBASIC7.56□□□□□ -1.2
LRCH3Q96II8 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LRCH3Q96II8 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LRCH3Q96II8 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 CCT8P1-201ENST00000413611 1657 ntBASIC7.55□□□□□ -1.2
LRCH3Q96II8 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.55□□□□□ -1.2
LRCH3Q96II8 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LRCH3Q96II8 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms