Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC091046.2-201ENST00000620775 665 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 U3.53-201ENST00000628922 216 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 SAMMSON-213ENST00000641336 1521 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ZNF137P-201ENST00000456718 1920 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 NEAT1-202ENST00000501122 22743 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC126755.2-208ENST00000327792 462 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC138969.1-213ENST00000331436 462 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 MIR137-201ENST00000385223 102 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RNA5SP397-201ENST00000391323 118 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RNA5SP296-201ENST00000410523 111 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 SNORA79B-201ENST00000410557 148 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RPL7P57-201ENST00000423238 740 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 MTCYBP32-201ENST00000427945 1084 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 DNAJC19P7-201ENST00000428811 344 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RPL23AP1-201ENST00000428990 471 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RHEBP2-201ENST00000450289 600 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RPS20P4-201ENST00000461659 355 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC021205.1-201ENST00000468797 348 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 OR52A4P-201ENST00000472867 958 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RPS17P11-201ENST00000474297 293 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 GTF2IP9-201ENST00000502460 301 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 PRELID3BP6-201ENST00000503839 571 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC093720.1-201ENST00000505681 714 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC069306.1-201ENST00000507006 843 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 RN7SKP92-201ENST00000517266 244 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC084759.1-201ENST00000561168 290 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 VN1R9P-201ENST00000614184 867 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AL512427.1-201ENST00000618593 349 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC004232.3-201ENST00000622977 525 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.04□□□□□ -1.6
BEST2Q8NFU1 AC108467.2-201ENST00000617640 1597 ntBASIC5.04□□□□□ -1.6
BEST2Q8NFU1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 KARSP3-201ENST00000571212 1504 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 STX3-208ENST00000641815 3236 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 MFSD8-213ENST00000641134 1327 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AC097461.1-201ENST00000568928 2821 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AC125257.1-201ENST00000560400 2930 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AL034374.1-201ENST00000406329 351 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 MIR1271-201ENST00000408537 86 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 RAB28P1-201ENST00000411517 641 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AC002524.1-201ENST00000411687 547 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.03□□□□□ -1.6
BEST2Q8NFU1 CNOT7P1-201ENST00000429006 852 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AC005189.1-201ENST00000431286 310 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AL035458.1-201ENST00000433096 585 ntBASIC5.03□□□□□ -1.6
BEST2Q8NFU1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms