Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.98□□□□□ -1.45
SYNE4Q8N205 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.98□□□□□ -1.45
SYNE4Q8N205 AC005261.2-201ENST00000593427 4258 ntBASIC5.98□□□□□ -1.45
SYNE4Q8N205 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNE4Q8N205 AL592148.3-201ENST00000608771 2646 ntBASIC5.98□□□□□ -1.45
SYNE4Q8N205 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SYNE4Q8N205 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.98□□□□□ -1.45
SYNE4Q8N205 AC009643.2-201ENST00000603543 1448 ntBASIC5.98□□□□□ -1.45
SYNE4Q8N205 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.98□□□□□ -1.45
SYNE4Q8N205 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC109446.4-201ENST00000623235 2755 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 RNU5B-4P-201ENST00000363508 111 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AL138880.1-201ENST00000405824 642 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 Y_RNA.599-201ENST00000410489 109 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 COX5BP7-201ENST00000414780 274 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 AL449283.1-202ENST00000418249 604 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 HIGD1AP4-201ENST00000430194 280 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 CCRL1P1-201ENST00000449542 1053 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 HMGB1P26-201ENST00000452520 628 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 Z95152.1-201ENST00000453556 656 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 RPL7AP10-201ENST00000481016 791 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 RPL21P129-201ENST00000491732 478 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 MTCYBP16-201ENST00000509187 1129 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC027455.1-201ENST00000574104 594 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC025588.2-201ENST00000604851 466 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AC083865.1-201ENST00000636634 831 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 SOCS5P3-201ENST00000425115 1576 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.97□□□□□ -1.45
SYNE4Q8N205 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SYNE4Q8N205 AL122126.1-201ENST00000546905 1318 ntBASIC5.97□□□□□ -1.45
SYNE4Q8N205 TTC41P-205ENST00000551270 3963 ntBASIC5.96□□□□□ -1.45
SYNE4Q8N205 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 ASNSP1-204ENST00000641977 1664 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 SNORA57.1-201ENST00000391227 145 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC007068.1-201ENST00000396690 844 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 USP9YP11-201ENST00000427537 717 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 RPS7P2-201ENST00000435134 607 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 MTCO2P7-201ENST00000446518 666 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 ELOCP30-201ENST00000447108 299 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AL157884.3-201ENST00000448273 1184 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC108463.1-201ENST00000450258 347 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC079168.2-201ENST00000453977 416 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 TPT1P1-201ENST00000458495 518 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 SYT14P1-201ENST00000481459 721 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 RNU6-709P-201ENST00000517257 104 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 OR4A2P-201ENST00000527276 913 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC109446.2-201ENST00000567872 497 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 RN7SL652P-201ENST00000577769 300 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC023575.1-201ENST00000580510 358 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC124856.1-201ENST00000600819 896 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AL592494.3-201ENST00000609485 464 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 MIR6716-201ENST00000613413 80 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms