Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 CEACAMP8-201ENST00000413902 580 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AL592293.2-201ENST00000422292 996 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC016712.1-201ENST00000431088 378 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 ZNF965P-201ENST00000432501 817 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC114495.1-201ENST00000441274 436 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 FHP1-201ENST00000442741 703 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 EIF2S2P2-201ENST00000447161 982 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AL157827.1-201ENST00000447622 132 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC017099.1-201ENST00000448261 1028 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 RN7SL98P-201ENST00000462271 300 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC011276.1-201ENST00000469688 323 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 RN7SL481P-201ENST00000477764 299 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC010476.1-201ENST00000519111 851 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 CYCSP28-201ENST00000534284 321 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 MIR4675-201ENST00000577898 77 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC079587.1-201ENST00000603846 277 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AL023583.1-201ENST00000607518 1143 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AL158196.1-201ENST00000616786 434 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC140113.4-201ENST00000622087 222 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC007546.2-201ENST00000623996 360 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 VPS35P1-201ENST00000563400 1518 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AL606537.1-201ENST00000607258 2011 ntBASIC4.09□□□□□ -1.76
C9orf40Q8IXQ3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
C9orf40Q8IXQ3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
C9orf40Q8IXQ3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
C9orf40Q8IXQ3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RNU1-108P-201ENST00000362556 161 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RNA5SP307-201ENST00000362863 116 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RNA5SP509-201ENST00000364577 119 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AL356057.1-202ENST00000402263 756 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RN7SKP167-201ENST00000411047 285 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 VDAC1P9-201ENST00000412766 841 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC004448.2-201ENST00000422360 586 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 NDUFA5P10-201ENST00000432147 357 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 CBX1P1-201ENST00000440184 427 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 PHBP16-201ENST00000446318 950 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 VN1R32P-201ENST00000452234 905 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC092905.1-201ENST00000467527 949 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC093663.2-201ENST00000484625 313 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 RN7SL810P-201ENST00000493031 276 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC108022.1-201ENST00000493466 478 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC024341.1-201ENST00000526444 1552 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 OR8X1P-201ENST00000534542 869 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 NOP56P3-201ENST00000549457 385 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 Z98200.1-201ENST00000607298 470 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 EOGT-210ENST00000615922 1931 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AL121890.3-201ENST00000618494 516 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 AC067931.1-201ENST00000624190 671 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 MFSD8-242ENST00000641690 4199 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 LINC01109-201ENST00000603837 3081 ntBASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
C9orf40Q8IXQ3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 MIR331-201ENST00000362302 94 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 RNU1-44P-201ENST00000384453 163 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms