Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC020634.1-201ENST00000608701 549 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC022400.9-201ENST00000623633 273 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 AC122713.2-201ENST00000624942 3335 ntBASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 OR4G1P-203ENST00000641984 1631 ntBASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 MTND5P10-201ENST00000603719 1809 ntBASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.9□□□□□ -1.31
NPAS3Q8IXF0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC125603.4-201ENST00000621942 2699 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 SNORD50B-201ENST00000364995 70 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.364-201ENST00000365532 101 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 RNU6-456P-201ENST00000384493 107 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.615-201ENST00000410769 117 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 RN7SKP296-201ENST00000411185 341 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AP000534.2-201ENST00000412729 568 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 CHEK2P3-201ENST00000416118 248 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 HSPE1P1-201ENST00000421494 318 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 RPL31P12-201ENST00000422587 358 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC083862.1-201ENST00000427378 1242 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 BMS1P19-201ENST00000433925 393 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC092013.1-201ENST00000438795 332 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC073109.1-201ENST00000445066 978 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC107399.1-201ENST00000451226 265 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC090589.1-201ENST00000473109 362 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC015911.1-201ENST00000495111 156 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC006390.1-201ENST00000508068 283 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 SNORA25.10-201ENST00000515926 124 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC087854.1-201ENST00000519706 414 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AP003115.1-201ENST00000569849 463 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC024023.1-201ENST00000624530 922 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 OR5BR1P-201ENST00000524992 1330 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 OR2AH1P-202ENST00000641232 2744 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 AC092111.1-201ENST00000618256 3358 ntBASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS3Q8IXF0 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms