Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 AC025125.1-201ENST00000624743 1922 ntBASIC4.44□□□□□ -1.7
C11orf88Q6PI97 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 AC015813.6-201ENST00000624409 5808 ntBASIC4.44□□□□□ -1.7
C11orf88Q6PI97 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
C11orf88Q6PI97 DCAF13P1-201ENST00000495256 1330 ntBASIC4.44□□□□□ -1.7
C11orf88Q6PI97 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC073055.1-201ENST00000456901 1621 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC053481.2-202ENST00000582394 1500 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 SNORA70E-201ENST00000384492 135 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 DSTNP4-201ENST00000399472 474 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 DBIP1-201ENST00000401435 260 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RN7SKP16-201ENST00000410180 299 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RNU2-21P-201ENST00000410368 188 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 EIF4A1P1-201ENST00000420241 934 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC092832.1-201ENST00000422934 400 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RPL36P19-201ENST00000430744 301 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC012075.1-201ENST00000436549 580 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC006994.1-201ENST00000438212 839 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AL929288.2-201ENST00000446368 407 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 BX248409.1-201ENST00000455497 255 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC011225.1-201ENST00000457751 369 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 SNORD108-201ENST00000459332 71 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RN7SL172P-201ENST00000460535 303 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RN7SL189P-201ENST00000468631 289 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RPL7P41-201ENST00000485823 957 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 TPT1P3-201ENST00000492841 512 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC074029.1-201ENST00000552531 1044 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 FKBP1AP1-201ENST00000594588 318 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC012616.1-201ENST00000600294 197 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 SUGT1P3-202ENST00000604259 383 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC005252.1-201ENST00000604518 1063 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 MIR8069-1-201ENST00000616627 86 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 AC005840.5-201ENST00000619166 599 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 MIR8069-2-201ENST00000621412 86 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 MIR4496-201ENST00000635896 61 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 NMD3P1-201ENST00000439704 1488 ntBASIC4.43□□□□□ -1.7
C11orf88Q6PI97 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
C11orf88Q6PI97 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 BTBD10P2-201ENST00000404779 676 ntBASIC4.42□□□□□ -1.7
C11orf88Q6PI97 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 GTF2IP2-201ENST00000424290 697 ntBASIC4.42□□□□□ -1.7
C11orf88Q6PI97 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.42□□□□□ -1.7
C11orf88Q6PI97 OR6D1P-201ENST00000436165 939 ntBASIC4.42□□□□□ -1.7
C11orf88Q6PI97 AL390119.1-201ENST00000440329 312 ntBASIC4.42□□□□□ -1.7
C11orf88Q6PI97 AC019185.1-201ENST00000442718 389 ntBASIC4.42□□□□□ -1.7
C11orf88Q6PI97 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms