Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR4429-201ENST00000580105 73 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 QTRT1P1-201ENST00000604344 1078 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AL669942.2-201ENST00000620352 697 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 ERCC6-202ENST00000374127 1782 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 RNU11-4P-201ENST00000391149 133 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 RN7SKP182-201ENST00000410772 298 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 TPT1P2-201ENST00000413105 503 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 RPL23AP89-201ENST00000439324 255 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AC091544.1-201ENST00000484702 348 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 AC010300.1-201ENST00000600671 5134 ntBASIC5.05□□□□□ -1.6
RFX7Q2KHR2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX7Q2KHR2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 OR13Z1P-201ENST00000416141 834 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 RRM2P4-201ENST00000441721 562 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC022655.2-201ENST00000577280 318 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 RNU4-89P-201ENST00000607443 133 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 CDRT1-208ENST00000630868 794 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 ENSAP1-201ENST00000392855 326 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC115285.1-201ENST00000424879 736 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 ARAFP2-201ENST00000440565 559 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 Z95327.1-201ENST00000446082 482 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 SETP1-201ENST00000556014 845 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 DPRXP4-201ENST00000578053 568 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC114878.2-201ENST00000604863 1251 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RFX7Q2KHR2 AC010608.2-201ENST00000624830 470 ntBASIC5.04□□□□□ -1.6
RFX7Q2KHR2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 AC116667.1-201ENST00000604855 2072 ntBASIC5.03□□□□□ -1.6
RFX7Q2KHR2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.03□□□□□ -1.6
RFX7Q2KHR2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 RN7SL585P-201ENST00000470538 280 ntBASIC5.03□□□□□ -1.6
RFX7Q2KHR2 SAP18P1-201ENST00000512058 390 ntBASIC5.03□□□□□ -1.6
RFX7Q2KHR2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 AC007599.1-201ENST00000568688 1174 ntBASIC5.03□□□□□ -1.6
RFX7Q2KHR2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.03□□□□□ -1.6
RFX7Q2KHR2 RLIMP1-201ENST00000339626 1680 ntBASIC5.03□□□□□ -1.6
RFX7Q2KHR2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AP000357.1-201ENST00000409926 1165 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms