Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL136363.1-201ENST00000605349 337 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 YWHAEP7-203ENST00000622054 312 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AL732618.1-201ENST00000623251 301 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC010928.1-201ENST00000592477 1447 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC068769.1-201ENST00000474767 2426 ntBASIC6.21□□□□□ -1.41
PCDH1Q08174 AC023245.2-201ENST00000530760 2978 ntBASIC6.21□□□□□ -1.41
PCDH1Q08174 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDH1Q08174 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 RNU6-845P-201ENST00000362578 103 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 RNY3P3-201ENST00000363816 102 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDH1Q08174 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AL359704.1-201ENST00000411586 781 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDH1Q08174 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 AL589872.1-201ENST00000426602 288 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 DYNLL1P7-201ENST00000429273 258 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 RPS24P8-201ENST00000431490 402 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 RPL22P17-201ENST00000438729 315 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 HMGB3P12-201ENST00000438745 556 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 CBX1P1-201ENST00000440184 427 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 GAPDHP37-201ENST00000442317 968 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 RPL17P49-201ENST00000443728 411 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 RPL31P11-202ENST00000454082 372 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 RPS20P20-201ENST00000460498 340 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AL355032.1-201ENST00000472981 438 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AC022415.1-202ENST00000486612 523 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AC018645.1-201ENST00000505003 109 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AC106800.3-201ENST00000511389 308 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 SNORA81.2-201ENST00000516868 170 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDH1Q08174 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 IGKV2-36-201ENST00000519999 223 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AF279873.1-201ENST00000523393 313 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC090502.2-201ENST00000549267 280 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC007424.1-203ENST00000554613 687 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 HMGN1P26-201ENST00000558737 303 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDH1Q08174 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 LINC02495-203ENST00000636704 242 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 FANCD2P2-201ENST00000437591 1400 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 AL161912.4-201ENST00000623889 2468 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 OR11H5P-202ENST00000641612 1325 ntBASIC6.21□□□□□ -1.42
PCDH1Q08174 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH1Q08174 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH1Q08174 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH1Q08174 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDH1Q08174 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDH1Q08174 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDH1Q08174 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AP000432.2-201ENST00000624164 2048 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 AL512646.1-201ENST00000269395 1077 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms