Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MAPK10-372ENST00000641954 3413 ntBASIC4.5□□□□□ -1.69
CBX1P83916 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CBX1P83916 AC100871.1-201ENST00000507871 1456 ntBASIC4.49□□□□□ -1.69
CBX1P83916 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CBX1P83916 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX1P83916 RNU6-666P-201ENST00000363499 107 ntBASIC4.49□□□□□ -1.69
CBX1P83916 RNU1-87P-201ENST00000363727 170 ntBASIC4.49□□□□□ -1.69
CBX1P83916 RNU6-31P-201ENST00000384388 108 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AL512504.1-201ENST00000415494 778 ntBASIC4.49□□□□□ -1.69
CBX1P83916 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.49□□□□□ -1.69
CBX1P83916 MTCO1P57-201ENST00000432182 261 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX1P83916 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX1P83916 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 VN1R32P-201ENST00000452234 905 ntBASIC4.49□□□□□ -1.69
CBX1P83916 RPL21P71-201ENST00000465598 459 ntBASIC4.49□□□□□ -1.69
CBX1P83916 RPL7L1P8-201ENST00000469911 741 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX1P83916 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 HMGB1P47-201ENST00000511281 589 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AC016550.3-201ENST00000515706 767 ntBASIC4.49□□□□□ -1.69
CBX1P83916 VTA1P2-201ENST00000520205 911 ntBASIC4.49□□□□□ -1.69
CBX1P83916 HIGD1AP18-201ENST00000520730 278 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX1P83916 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX1P83916 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 AC027243.2-201ENST00000602530 724 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 OR7A19P-201ENST00000608051 733 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AL391834.1-201ENST00000609609 560 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AC005840.5-201ENST00000619166 599 ntBASIC4.49□□□□□ -1.69
CBX1P83916 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 AC244205.2-202ENST00000635781 342 ntBASIC4.49□□□□□ -1.69
CBX1P83916 AL049767.1-202ENST00000637826 242 ntBASIC4.49□□□□□ -1.69
CBX1P83916 OR2L1P-202ENST00000641567 1023 ntBASIC4.49□□□□□ -1.69
CBX1P83916 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CBX1P83916 MAPK10-263ENST00000641052 4307 ntBASIC4.49□□□□□ -1.69
CBX1P83916 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX1P83916 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX1P83916 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX1P83916 AC009229.4-201ENST00000623854 1947 ntBASIC4.48□□□□□ -1.69
CBX1P83916 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX1P83916 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CBX1P83916 RN7SKP44-201ENST00000363602 316 ntBASIC4.48□□□□□ -1.69
CBX1P83916 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX1P83916 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.48□□□□□ -1.69
CBX1P83916 RN7SKP126-201ENST00000411143 300 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.48□□□□□ -1.69
CBX1P83916 AL158073.1-201ENST00000426848 1104 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC017083.1-201ENST00000428093 483 ntBASIC4.48□□□□□ -1.69
CBX1P83916 MTCO1P54-201ENST00000430139 712 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.48□□□□□ -1.69
CBX1P83916 RPS20P1-201ENST00000434853 354 ntBASIC4.48□□□□□ -1.69
CBX1P83916 RPL12P46-201ENST00000436610 195 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.48□□□□□ -1.69
CBX1P83916 AP002345.1-201ENST00000456493 928 ntBASIC4.48□□□□□ -1.69
CBX1P83916 RNU7-27P-201ENST00000459281 62 ntBASIC4.48□□□□□ -1.69
CBX1P83916 APOOP2-201ENST00000461561 539 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.48□□□□□ -1.69
CBX1P83916 BX510359.5-201ENST00000515651 304 ntBASIC4.48□□□□□ -1.69
CBX1P83916 RNU6-1308P-201ENST00000516817 103 ntBASIC4.48□□□□□ -1.69
CBX1P83916 RNU6-1231P-201ENST00000517185 103 ntBASIC4.48□□□□□ -1.69
CBX1P83916 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 TOMM20P2-201ENST00000540082 421 ntBASIC4.48□□□□□ -1.69
CBX1P83916 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.48□□□□□ -1.69
CBX1P83916 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 AC133555.2-201ENST00000550213 292 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.48□□□□□ -1.69
CBX1P83916 AC090888.3-201ENST00000558917 509 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC022884.3-201ENST00000579571 248 ntBASIC4.48□□□□□ -1.69
CBX1P83916 SS18L2P2-201ENST00000583960 235 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.48□□□□□ -1.69
CBX1P83916 PSMA6P4-201ENST00000603247 718 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC090948.2-201ENST00000607363 564 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC135803.1-201ENST00000608748 565 ntBASIC4.48□□□□□ -1.69
CBX1P83916 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 AC007497.1-201ENST00000610421 561 ntBASIC4.48□□□□□ -1.69
CBX1P83916 AC079395.2-201ENST00000610982 737 ntBASIC4.48□□□□□ -1.69
CBX1P83916 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms