Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.49□□□□□ -1.69
SEC61A1P61619 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 RNU4-51P-201ENST00000364206 140 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SEC61A1P61619 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 MIR223-201ENST00000385204 110 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 RNU1-149P-201ENST00000390870 161 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.49□□□□□ -1.69
SEC61A1P61619 RNU2-22P-201ENST00000411266 212 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 VTA1P1-201ENST00000414044 866 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 TAF13P2-201ENST00000416876 286 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 MORF4L1P6-201ENST00000418771 268 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 PTP4A1P5-201ENST00000420305 455 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 USP9YP26-201ENST00000421008 661 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AL672138.1-201ENST00000450604 1015 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 NECAP1P2-201ENST00000455668 727 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC026348.1-201ENST00000462549 1053 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AP000942.1-201ENST00000463969 747 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC005532.2-201ENST00000467154 373 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC112206.1-201ENST00000468416 477 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 RN7SL222P-201ENST00000476452 299 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC079841.1-201ENST00000481228 950 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 RPS21P4-201ENST00000487122 248 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 ARL4AP1-201ENST00000503220 705 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC073358.1-201ENST00000505671 684 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 HMGB1P44-201ENST00000508597 572 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC105031.1-201ENST00000518550 476 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.49□□□□□ -1.69
SEC61A1P61619 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.49□□□□□ -1.69
SEC61A1P61619 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 NPM1P47-201ENST00000560843 856 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AP005136.1-201ENST00000579765 429 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 MIR548Y-201ENST00000582739 110 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AP003392.5-201ENST00000607857 415 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AL021707.7-201ENST00000607991 416 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC018445.2-201ENST00000622987 260 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 AC024023.1-201ENST00000624530 922 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 LINC02211-204ENST00000642024 1070 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 AP001273.1-201ENST00000624493 3152 ntBASIC4.49□□□□□ -1.69
SEC61A1P61619 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SEC61A1P61619 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
SEC61A1P61619 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SEC61A1P61619 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A1P61619 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A1P61619 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A1P61619 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
SEC61A1P61619 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SEC61A1P61619 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SEC61A1P61619 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SEC61A1P61619 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A1P61619 SCARNA15-201ENST00000607520 4325 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A1P61619 AC005294.1-201ENST00000355509 281 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 SNORD116.1-201ENST00000365628 92 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 HMGB3P7-201ENST00000400214 611 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 HSPA8P15-201ENST00000401676 786 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 DNAJC19P6-201ENST00000401853 280 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A1P61619 FCF1P5-201ENST00000406490 482 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 RNU4-34P-201ENST00000410431 124 ntBASIC4.48□□□□□ -1.69
SEC61A1P61619 RN7SKP273-201ENST00000411392 314 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms