Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
MCCD1P59942 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.09□□□□□ -1.27
MCCD1P59942 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MCCD1P59942 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MCCD1P59942 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.09□□□□□ -1.27
MCCD1P59942 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MCCD1P59942 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MCCD1P59942 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MCCD1P59942 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
MCCD1P59942 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
MCCD1P59942 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
MCCD1P59942 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 SMG1P7-201ENST00000565246 2704 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC006511.3-201ENST00000624929 1783 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 RNU5E-1-201ENST00000362477 120 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 RNA5SP350-201ENST00000363298 111 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 RNA5SP442-201ENST00000365050 107 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 RNU6-74P-201ENST00000384235 107 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 RNU6-1158P-201ENST00000391167 107 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 RPL7P25-201ENST00000404151 721 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC006509.1-201ENST00000420788 634 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 RPS3AP38-201ENST00000435889 763 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 MORF4-201ENST00000447135 971 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AL136380.1-201ENST00000447970 162 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 RPL31P11-202ENST00000454082 372 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC010301.1-201ENST00000473936 355 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC023818.1-201ENST00000498379 384 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC110792.2-201ENST00000510278 224 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC112206.3-201ENST00000514578 389 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 AL133399.1-201ENST00000527476 298 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 OR5B19P-201ENST00000531766 928 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC244034.2-201ENST00000562504 509 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 AC004805.3-201ENST00000603178 310 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC011468.4-201ENST00000603942 409 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC078899.5-201ENST00000612475 178 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC233309.1-201ENST00000619522 751 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC090971.5-201ENST00000621102 293 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 AC009161.2-201ENST00000624626 138 ntBASIC7.08□□□□□ -1.28
MCCD1P59942 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.08□□□□□ -1.28
MCCD1P59942 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.08□□□□□ -1.28
MCCD1P59942 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
MCCD1P59942 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MCCD1P59942 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
MCCD1P59942 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.07□□□□□ -1.28
MCCD1P59942 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
MCCD1P59942 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MCCD1P59942 AC005618.1-201ENST00000606901 3148 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.07□□□□□ -1.28
MCCD1P59942 SNORA20.2-201ENST00000383922 131 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 U3.52-201ENST00000384034 216 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
MCCD1P59942 AL591416.1-201ENST00000404015 867 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 RNU2-6P-201ENST00000411404 190 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 ELOCP4-201ENST00000420090 333 ntBASIC7.07□□□□□ -1.28
MCCD1P59942 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
MCCD1P59942 AL589794.1-201ENST00000424971 390 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms