Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPL7P30-201ENST00000420888 709 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 AC083862.1-201ENST00000427378 1242 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 RPL12P18-201ENST00000437175 325 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AL391987.1-201ENST00000441025 200 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 PMS2P9-201ENST00000441237 515 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 GDI2P2-201ENST00000445131 608 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 MTCO1P48-201ENST00000448024 1096 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 RPL39P6-201ENST00000448289 150 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC12P31275 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 AC010301.1-201ENST00000473936 355 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC12P31275 FCF1P3-201ENST00000496394 590 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AC114981.1-201ENST00000503897 678 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 DUTP7-201ENST00000507982 486 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 KRT19P6-201ENST00000510983 209 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXC12P31275 RNA5SP418-201ENST00000515951 117 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXC12P31275 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 IGKV1D-22-201ENST00000518953 324 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 UBE2FP2-201ENST00000566646 462 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXC12P31275 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 AC026898.1-201ENST00000586404 571 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC12P31275 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 AC011445.2-201ENST00000599274 173 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 AC233280.2-201ENST00000603917 1070 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AL133338.2-201ENST00000604292 736 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AP001437.1-201ENST00000608783 456 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AL096712.1-201ENST00000614561 159 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 MIR6886-201ENST00000619864 61 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 SNX18P12-201ENST00000624821 759 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AC005609.4-201ENST00000625071 447 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC12P31275 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC12P31275 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.65□□□□□ -1.51
HOXC12P31275 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC12P31275 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC12P31275 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC12P31275 AC079097.1-201ENST00000512187 1399 ntBASIC5.65□□□□□ -1.51
HOXC12P31275 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HOXC12P31275 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
HOXC12P31275 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC12P31275 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC12P31275 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HOXC12P31275 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.65□□□□□ -1.51
HOXC12P31275 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.65□□□□□ -1.51
HOXC12P31275 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 AL034370.1-201ENST00000397254 1590 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 LPAL2-203ENST00000454031 2498 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 AL121878.1-201ENST00000418638 859 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 SDCBPP2-201ENST00000424643 885 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 LYPLA1P1-201ENST00000434514 622 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 FABP5P2-201ENST00000439042 408 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 MTND4P25-201ENST00000441039 533 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 CXCR2P1-202ENST00000443392 1074 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 RPL7P36-201ENST00000444633 681 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC022431.1-201ENST00000450941 438 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXC12P31275 RN7SL714P-201ENST00000487050 298 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms