Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 AL449283.1-201ENST00000602631 3403 ntBASIC8.51□□□□□ -1.05
CD44P16070 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.5□□□□□ -1.05
CD44P16070 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 RNY1P16-201ENST00000363063 111 ntBASIC8.5□□□□□ -1.05
CD44P16070 Y_RNA.215-201ENST00000364204 112 ntBASIC8.5□□□□□ -1.05
CD44P16070 RNU1-122P-201ENST00000365538 156 ntBASIC8.5□□□□□ -1.05
CD44P16070 Y_RNA.581-201ENST00000391017 97 ntBASIC8.5□□□□□ -1.05
CD44P16070 PHBP1-201ENST00000392260 808 ntBASIC8.5□□□□□ -1.05
CD44P16070 AL356421.1-201ENST00000403255 413 ntBASIC8.5□□□□□ -1.05
CD44P16070 PKMP3-201ENST00000405497 715 ntBASIC8.5□□□□□ -1.05
CD44P16070 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 CYP4F30P-202ENST00000420048 405 ntBASIC8.5□□□□□ -1.05
CD44P16070 PTGES3P4-201ENST00000426243 356 ntBASIC8.5□□□□□ -1.05
CD44P16070 CTBP2P1-201ENST00000431853 245 ntBASIC8.5□□□□□ -1.05
CD44P16070 AL161454.1-201ENST00000446226 569 ntBASIC8.5□□□□□ -1.05
CD44P16070 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.5□□□□□ -1.05
CD44P16070 HMGB1P4-201ENST00000455362 567 ntBASIC8.5□□□□□ -1.05
CD44P16070 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC8.5□□□□□ -1.05
CD44P16070 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.5□□□□□ -1.05
CD44P16070 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.5□□□□□ -1.05
CD44P16070 AC092868.1-201ENST00000557949 802 ntBASIC8.5□□□□□ -1.05
CD44P16070 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.5□□□□□ -1.05
CD44P16070 AC106782.4-201ENST00000568264 210 ntBASIC8.5□□□□□ -1.05
CD44P16070 MIR4437-201ENST00000581331 60 ntBASIC8.5□□□□□ -1.05
CD44P16070 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 AC087885.1-201ENST00000641910 848 ntBASIC8.5□□□□□ -1.05
CD44P16070 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CD44P16070 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.5□□□□□ -1.05
CD44P16070 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.5□□□□□ -1.05
CD44P16070 AL096816.1-201ENST00000623300 2920 ntBASIC8.5□□□□□ -1.05
CD44P16070 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CD44P16070 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.49□□□□□ -1.05
CD44P16070 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CD44P16070 AL161781.1-201ENST00000354277 403 ntBASIC8.49□□□□□ -1.05
CD44P16070 RNU6-151P-201ENST00000364158 107 ntBASIC8.49□□□□□ -1.05
CD44P16070 LST1-211ENST00000376110 433 ntTSL 3 BASIC8.49□□□□□ -1.05
CD44P16070 RNY4P18-201ENST00000391107 89 ntBASIC8.49□□□□□ -1.05
CD44P16070 RPSAP72-201ENST00000407020 358 ntBASIC8.49□□□□□ -1.05
CD44P16070 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC8.49□□□□□ -1.05
CD44P16070 ANKRD54P1-201ENST00000433115 471 ntBASIC8.49□□□□□ -1.05
CD44P16070 AL645568.3-201ENST00000433683 316 ntBASIC8.49□□□□□ -1.05
CD44P16070 RPS7P5-201ENST00000441482 581 ntBASIC8.49□□□□□ -1.05
CD44P16070 AL137074.1-201ENST00000442640 465 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC239809.1-201ENST00000450470 217 ntBASIC8.49□□□□□ -1.05
CD44P16070 CBX1P2-201ENST00000453841 458 ntBASIC8.49□□□□□ -1.05
CD44P16070 AP001324.2-201ENST00000461163 319 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC096922.1-201ENST00000461635 651 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC104849.1-201ENST00000462623 405 ntBASIC8.49□□□□□ -1.05
CD44P16070 RPL21P8-201ENST00000465083 535 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.49□□□□□ -1.05
CD44P16070 RN7SL36P-201ENST00000469345 276 ntBASIC8.49□□□□□ -1.05
CD44P16070 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC8.49□□□□□ -1.05
CD44P16070 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.49□□□□□ -1.05
CD44P16070 RN7SL862P-201ENST00000491550 298 ntBASIC8.49□□□□□ -1.05
CD44P16070 FTH1P21-201ENST00000512179 511 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC8.49□□□□□ -1.05
CD44P16070 IGHVII-62-1-201ENST00000519283 235 ntBASIC8.49□□□□□ -1.05
CD44P16070 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
CD44P16070 AC092375.1-201ENST00000550410 637 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC007956.1-201ENST00000555623 542 ntBASIC8.49□□□□□ -1.05
CD44P16070 AC009171.1-201ENST00000572673 266 ntBASIC8.49□□□□□ -1.05
CD44P16070 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CD44P16070 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.49□□□□□ -1.05
CD44P16070 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.49□□□□□ -1.05
CD44P16070 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.49□□□□□ -1.05
CD44P16070 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.49□□□□□ -1.05
CD44P16070 AC123788.2-201ENST00000612290 283 ntBASIC8.49□□□□□ -1.05
CD44P16070 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC8.49□□□□□ -1.05
CD44P16070 Z99571.1-201ENST00000636677 394 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms