Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.49□□□□□ -1.85
CTSDP07339 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.49□□□□□ -1.85
CTSDP07339 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.49□□□□□ -1.85
CTSDP07339 MIR486-1-201ENST00000612171 68 ntBASIC3.49□□□□□ -1.85
CTSDP07339 RN7SL722P-201ENST00000617780 284 ntBASIC3.49□□□□□ -1.85
CTSDP07339 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.49□□□□□ -1.85
CTSDP07339 RN7SL565P-201ENST00000618246 284 ntBASIC3.49□□□□□ -1.85
CTSDP07339 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.49□□□□□ -1.85
CTSDP07339 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.49□□□□□ -1.85
CTSDP07339 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTSDP07339 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CTSDP07339 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTSDP07339 AC106871.1-201ENST00000568324 3102 ntBASIC3.49□□□□□ -1.85
CTSDP07339 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTSDP07339 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.49□□□□□ -1.85
CTSDP07339 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTSDP07339 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.48□□□□□ -1.85
CTSDP07339 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.48□□□□□ -1.85
CTSDP07339 MARK2P15-201ENST00000432204 2186 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.48□□□□□ -1.85
CTSDP07339 RLIMP2-201ENST00000427891 1563 ntBASIC3.48□□□□□ -1.85
CTSDP07339 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 AC008033.1-201ENST00000216407 1162 ntBASIC3.48□□□□□ -1.85
CTSDP07339 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 AMD1P2-201ENST00000412936 992 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AL450992.3-201ENST00000413192 568 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.48□□□□□ -1.85
CTSDP07339 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.48□□□□□ -1.85
CTSDP07339 RPL36AP15-201ENST00000444514 266 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.48□□□□□ -1.85
CTSDP07339 AC010326.1-201ENST00000462726 602 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AC096741.1-201ENST00000472250 846 ntBASIC3.48□□□□□ -1.85
CTSDP07339 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.48□□□□□ -1.85
CTSDP07339 RFPL4AP3-201ENST00000515267 345 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.48□□□□□ -1.85
CTSDP07339 DEFB109D-201ENST00000529497 240 ntBASIC3.48□□□□□ -1.85
CTSDP07339 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.48□□□□□ -1.85
CTSDP07339 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.48□□□□□ -1.85
CTSDP07339 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.48□□□□□ -1.85
CTSDP07339 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.48□□□□□ -1.85
CTSDP07339 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.48□□□□□ -1.85
CTSDP07339 MRPS35P3-201ENST00000603189 709 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AL354984.3-201ENST00000604803 325 ntBASIC3.48□□□□□ -1.85
CTSDP07339 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.48□□□□□ -1.85
CTSDP07339 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.48□□□□□ -1.85
CTSDP07339 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.48□□□□□ -1.85
CTSDP07339 AL773545.4-201ENST00000637262 310 ntBASIC3.48□□□□□ -1.85
CTSDP07339 AC008013.2-202ENST00000637965 364 ntBASIC3.48□□□□□ -1.85
CTSDP07339 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CTSDP07339 AL513478.4-201ENST00000641636 310 ntBASIC3.48□□□□□ -1.85
CTSDP07339 FAM35DP-201ENST00000323387 2712 ntBASIC3.48□□□□□ -1.85
CTSDP07339 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTSDP07339 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.47□□□□□ -1.85
CTSDP07339 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.47□□□□□ -1.85
CTSDP07339 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.47□□□□□ -1.85
CTSDP07339 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CTSDP07339 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CTSDP07339 PGBD4P8-201ENST00000412993 562 ntBASIC3.47□□□□□ -1.85
CTSDP07339 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.47□□□□□ -1.85
CTSDP07339 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.47□□□□□ -1.85
CTSDP07339 NFYAP1-201ENST00000431953 972 ntBASIC3.47□□□□□ -1.85
CTSDP07339 NDUFA5P1-201ENST00000433858 341 ntBASIC3.47□□□□□ -1.85
CTSDP07339 AC096638.2-201ENST00000434965 711 ntBASIC3.47□□□□□ -1.85
CTSDP07339 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 RN7SL354P-201ENST00000469282 294 ntBASIC3.47□□□□□ -1.85
CTSDP07339 RPS29P19-201ENST00000479709 171 ntBASIC3.47□□□□□ -1.85
CTSDP07339 AC098583.1-201ENST00000480875 255 ntBASIC3.47□□□□□ -1.85
CTSDP07339 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.47□□□□□ -1.85
CTSDP07339 AC106872.2-201ENST00000494303 480 ntBASIC3.47□□□□□ -1.85
CTSDP07339 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CTSDP07339 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.47□□□□□ -1.85
CTSDP07339 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 MIR2114-201ENST00000516645 80 ntBASIC3.47□□□□□ -1.85
CTSDP07339 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.47□□□□□ -1.85
CTSDP07339 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.47□□□□□ -1.85
CTSDP07339 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.47□□□□□ -1.85
CTSDP07339 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CTSDP07339 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.47□□□□□ -1.85
CTSDP07339 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.47□□□□□ -1.85
CTSDP07339 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTSDP07339 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms