Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 THAP12P4-201ENST00000528321 2266 ntBASIC4.46□□□□□ -1.7
SNX3O60493 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 OR10J6P-201ENST00000289731 930 ntBASIC4.45□□□□□ -1.7
SNX3O60493 RNA5SP388-201ENST00000362584 119 ntBASIC4.45□□□□□ -1.7
SNX3O60493 RNA5SP455-201ENST00000365190 119 ntBASIC4.45□□□□□ -1.7
SNX3O60493 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 RNU6-98P-201ENST00000384173 107 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.45□□□□□ -1.7
SNX3O60493 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.45□□□□□ -1.7
SNX3O60493 HMGB3P18-201ENST00000406327 590 ntBASIC4.45□□□□□ -1.7
SNX3O60493 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX3O60493 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 RPS3P2-201ENST00000421346 701 ntBASIC4.45□□□□□ -1.7
SNX3O60493 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 FO393414.1-201ENST00000428697 1184 ntBASIC4.45□□□□□ -1.7
SNX3O60493 ETF1P3-201ENST00000430422 1160 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 FTH1P16-201ENST00000435241 552 ntBASIC4.45□□□□□ -1.7
SNX3O60493 GSTA7P-201ENST00000438425 448 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 ARL5AP2-201ENST00000444698 533 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 SLC25A18P1-201ENST00000449385 454 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 AC108463.1-201ENST00000450258 347 ntBASIC4.45□□□□□ -1.7
SNX3O60493 YWHAEP1-201ENST00000453697 763 ntBASIC4.45□□□□□ -1.7
SNX3O60493 DDX39BP2-208ENST00000453923 258 ntBASIC4.45□□□□□ -1.7
SNX3O60493 RPS27AP2-201ENST00000457576 465 ntBASIC4.45□□□□□ -1.7
SNX3O60493 RPS27AP16-201ENST00000492222 470 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX3O60493 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.45□□□□□ -1.7
SNX3O60493 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 PHBP17-201ENST00000528576 541 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AP002812.4-201ENST00000532139 286 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC022404.1-201ENST00000555320 273 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX3O60493 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX3O60493 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX3O60493 AC011447.4-201ENST00000587562 111 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC006116.7-201ENST00000590141 756 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 AC012603.1-201ENST00000606424 528 ntBASIC4.45□□□□□ -1.7
SNX3O60493 OR7A19P-201ENST00000608051 733 ntBASIC4.45□□□□□ -1.7
SNX3O60493 OR2BH1P-201ENST00000608850 864 ntBASIC4.45□□□□□ -1.7
SNX3O60493 MIR7973-1-201ENST00000614683 76 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC078880.5-201ENST00000617845 421 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX3O60493 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC010872.1-201ENST00000624225 675 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AC015726.3-201ENST00000624501 418 ntBASIC4.45□□□□□ -1.7
SNX3O60493 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SNX3O60493 ZNF962P-201ENST00000443465 3140 ntBASIC4.45□□□□□ -1.7
SNX3O60493 AL442639.1-201ENST00000625030 1899 ntBASIC4.45□□□□□ -1.7
SNX3O60493 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX3O60493 AC139769.1-204ENST00000472297 1931 ntBASIC4.44□□□□□ -1.7
SNX3O60493 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AC092079.1-201ENST00000558620 1985 ntBASIC4.44□□□□□ -1.7
SNX3O60493 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
SNX3O60493 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SNX3O60493 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 DPPA2P3-201ENST00000411853 655 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AL591848.1-201ENST00000413092 322 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 RPL7P29-201ENST00000437151 728 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 ABCF2P2-201ENST00000450549 296 ntBASIC4.44□□□□□ -1.7
SNX3O60493 HMGB3P22-202ENST00000451823 572 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 AC084754.1-201ENST00000463466 464 ntBASIC4.44□□□□□ -1.7
SNX3O60493 RPL23AP12-201ENST00000467573 473 ntBASIC4.44□□□□□ -1.7
SNX3O60493 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 BX510359.5-201ENST00000515651 304 ntBASIC4.44□□□□□ -1.7
SNX3O60493 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.44□□□□□ -1.7
SNX3O60493 AL049779.2-201ENST00000553847 315 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 406.5 ms