Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HOXA2O43364 RPL32P28-201ENST00000443577 397 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.39□□□□□ -1.23
HOXA2O43364 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.39□□□□□ -1.23
HOXA2O43364 AL034399.1-201ENST00000451535 380 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 AL583843.1-201ENST00000456070 346 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 RNU6-1208P-201ENST00000459588 107 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 GMFBP1-201ENST00000467831 427 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.39□□□□□ -1.23
HOXA2O43364 AC026782.1-201ENST00000512952 449 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.39□□□□□ -1.23
HOXA2O43364 AC114797.1-201ENST00000514003 728 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.39□□□□□ -1.23
HOXA2O43364 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.39□□□□□ -1.23
HOXA2O43364 COPS8P3-201ENST00000526024 482 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HOXA2O43364 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HOXA2O43364 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.39□□□□□ -1.23
HOXA2O43364 NPM1P42-201ENST00000560329 862 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 AC244034.2-201ENST00000562504 509 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 RN7SL230P-201ENST00000580835 303 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.39□□□□□ -1.23
HOXA2O43364 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.39□□□□□ -1.23
HOXA2O43364 AP000654.2-201ENST00000605633 586 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.39□□□□□ -1.23
HOXA2O43364 AC022418.1-201ENST00000624118 445 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 CR381572.1-201ENST00000625098 102 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.39□□□□□ -1.23
HOXA2O43364 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HOXA2O43364 MAPK10-357ENST00000641831 2858 ntBASIC7.39□□□□□ -1.23
HOXA2O43364 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HOXA2O43364 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
HOXA2O43364 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HOXA2O43364 MTND4P1-201ENST00000457501 1466 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.38□□□□□ -1.23
HOXA2O43364 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 OR1S2-201ENST00000302592 978 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 Y_RNA.149-201ENST00000363558 117 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 Y_RNA.188-201ENST00000363952 111 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 RNU6-702P-201ENST00000364982 107 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 RNA5SP85-201ENST00000365378 119 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
HOXA2O43364 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 PABPC1P3-201ENST00000469174 459 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 FAM206BP-201ENST00000510179 541 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 RNU6-202P-201ENST00000515998 96 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 Y_RNA.665-201ENST00000516177 98 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 RNA5SP473-201ENST00000516402 125 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 AC009902.1-201ENST00000519351 183 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 EEF1B2P2-201ENST00000519625 676 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 AC107934.1-201ENST00000522215 217 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 AC017100.2-201ENST00000584628 355 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 RPL29P33-201ENST00000587474 316 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.38□□□□□ -1.23
HOXA2O43364 AC111186.1-201ENST00000604684 130 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 AL591926.1-201ENST00000620542 217 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
HOXA2O43364 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.38□□□□□ -1.23
HOXA2O43364 AC123769.2-201ENST00000624332 5984 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 AL023806.3-201ENST00000638502 2704 ntBASIC7.38□□□□□ -1.23
HOXA2O43364 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
HOXA2O43364 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.38□□□□□ -1.23
HOXA2O43364 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HOXA2O43364 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.37□□□□□ -1.23
HOXA2O43364 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HOXA2O43364 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
HOXA2O43364 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HOXA2O43364 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HOXA2O43364 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.37□□□□□ -1.23
HOXA2O43364 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HOXA2O43364 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
HOXA2O43364 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
HOXA2O43364 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms