Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 NPM1P47-201ENST00000560843 856 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 SS18L2P2-201ENST00000583960 235 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC139769.3-201ENST00000618383 175 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 PNPT1P2-201ENST00000456768 2050 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC093311.1-201ENST00000506586 2021 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC134882.1-201ENST00000603738 1676 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 RNU6-618P-201ENST00000363518 112 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 RNA5SP507-201ENST00000363603 121 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 RNA5SP455-201ENST00000365190 119 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 RNU6-171P-201ENST00000384354 107 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 U3.30-201ENST00000391308 210 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL607077.1-201ENST00000401718 499 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 Z98745.1-201ENST00000402553 494 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL138878.1-201ENST00000405131 347 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 CEACAMP7-201ENST00000444105 496 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL157827.1-201ENST00000447622 132 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC234781.3-201ENST00000452540 973 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 OR52A4P-201ENST00000472867 958 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC010683.1-201ENST00000473673 378 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 RPS27AP16-201ENST00000492222 470 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC021146.7-201ENST00000509604 775 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 RN7SKP66-201ENST00000516681 231 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC008083.2-201ENST00000546707 476 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC009303.3-201ENST00000591103 736 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AC005034.4-201ENST00000603612 899 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 MIR486-1-201ENST00000612171 68 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL139811.1-201ENST00000424779 2299 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL442639.1-201ENST00000625030 1899 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 AL133412.1-201ENST00000380194 2992 ntBASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RBFOX3A6NFN3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RPL23P2-201ENST00000320371 421 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RNU6-666P-201ENST00000363499 107 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RNU6-891P-201ENST00000384280 111 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RN7SKP278-201ENST00000410504 342 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RN7SKP213-201ENST00000410746 298 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 AC013404.1-201ENST00000413068 249 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 BX510359.3-201ENST00000422168 306 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 USP12PY-201ENST00000427677 1064 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 AC007563.3-201ENST00000433233 371 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 OR52B5P-201ENST00000435337 951 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RHOT1P3-201ENST00000436571 331 ntBASIC3.46□□□□□ -1.86
RBFOX3A6NFN3 RPL23AP89-201ENST00000439324 255 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms