Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EEF1A1P1-201ENST00000447052 739 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC053481.1-201ENST00000467217 306 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RPS29P22-201ENST00000472363 168 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC106872.2-201ENST00000494303 480 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC111000.3-201ENST00000508057 576 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RN7SKP92-201ENST00000517266 244 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC135001.1-201ENST00000544546 283 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RPL23AP97-201ENST00000568955 471 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 SNORD39.2-201ENST00000579995 76 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC017076.1-201ENST00000607613 578 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC002044.3-201ENST00000623314 541 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 AC012618.3-205ENST00000637896 1496 ntBASIC3.28□□□□□ -1.88
HLA-DRB4X5D2U9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
HLA-DRB4X5D2U9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
HLA-DRB4X5D2U9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 RNA5SP505-201ENST00000364748 108 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 RNU6-398P-201ENST00000384143 109 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 MIR3065-201ENST00000390137 79 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 RN7SKP56-201ENST00000410513 331 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 RPS20P14-201ENST00000412545 360 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC092647.1-201ENST00000420654 287 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 DPY19L1P2-201ENST00000426647 915 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 PRELID3BP10-201ENST00000431957 584 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC011998.1-201ENST00000433403 117 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 UBE2V1P3-201ENST00000439651 417 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 IFNWP4-201ENST00000453148 294 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 RPL21P126-201ENST00000470049 478 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC007686.1-201ENST00000488511 463 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AK3P4-201ENST00000504283 583 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC137768.1-201ENST00000549998 553 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC020915.5-201ENST00000596836 964 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 RPL12P25-202ENST00000598100 674 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC093765.1-201ENST00000603758 881 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AL160290.3-201ENST00000604869 165 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC110741.2-201ENST00000605278 268 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC012409.3-201ENST00000611343 981 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 MIR6891-201ENST00000618788 93 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 AL132640.2-201ENST00000559968 1698 ntBASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DRB4X5D2U9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 FAM35DP-201ENST00000323387 2712 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 OR5P1P-201ENST00000299512 925 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 RNA5SP322-201ENST00000363617 119 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 CYB5AP4-201ENST00000396692 399 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 MIR937-201ENST00000401271 86 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AL450992.3-201ENST00000413192 568 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 RPS23P10-201ENST00000416185 486 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 RPEP3-201ENST00000425462 676 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 RPL23AP1-201ENST00000428990 471 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 HMGB3P22-202ENST00000451823 572 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 MTND2P28-201ENST00000457540 1044 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms