Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NINLQ9Y2I6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.97□□□□□ -1.45
NINLQ9Y2I6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NINLQ9Y2I6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NINLQ9Y2I6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RNU1-14P-201ENST00000362759 152 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RNU1-44P-201ENST00000384453 163 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 SEPT7P8-201ENST00000413308 775 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RPL7P2-201ENST00000427639 268 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RPEP2-201ENST00000432149 701 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RNA5SP246-201ENST00000458909 119 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 ATP1B1P1-201ENST00000509767 915 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RNA5SP49-201ENST00000516450 115 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 RNA5SP73-201ENST00000516744 108 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NINLQ9Y2I6 ZNF415P1-201ENST00000582279 1166 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 AC084757.4-201ENST00000616350 526 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 AC024023.1-201ENST00000624530 922 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 PROS2P-201ENST00000474651 1951 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.96□□□□□ -1.45
NINLQ9Y2I6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NINLQ9Y2I6 AL133243.3-201ENST00000617415 3004 ntBASIC5.96□□□□□ -1.46
NINLQ9Y2I6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AL078604.1-201ENST00000404609 466 ntBASIC5.95□□□□□ -1.46
NINLQ9Y2I6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 RPS20P14-201ENST00000412545 360 ntBASIC5.95□□□□□ -1.46
NINLQ9Y2I6 MFSD13B-201ENST00000420133 1290 ntBASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AC119751.5-201ENST00000514077 770 ntBASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AC027455.1-201ENST00000574104 594 ntBASIC5.95□□□□□ -1.46
NINLQ9Y2I6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AL451086.1-201ENST00000605596 223 ntBASIC5.95□□□□□ -1.46
NINLQ9Y2I6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.95□□□□□ -1.46
NINLQ9Y2I6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 RPL21P89-201ENST00000444021 467 ntBASIC5.94□□□□□ -1.46
NINLQ9Y2I6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.94□□□□□ -1.46
NINLQ9Y2I6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 AL352979.3-201ENST00000553515 247 ntBASIC5.94□□□□□ -1.46
NINLQ9Y2I6 AL353726.1-201ENST00000614041 1000 ntBASIC5.94□□□□□ -1.46
NINLQ9Y2I6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 A2MP1-204ENST00000566278 4130 ntBASIC5.94□□□□□ -1.46
NINLQ9Y2I6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NINLQ9Y2I6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NINLQ9Y2I6 RNA5SP175-201ENST00000364275 119 ntBASIC5.93□□□□□ -1.46
NINLQ9Y2I6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
NINLQ9Y2I6 RN7SKP235-201ENST00000410662 305 ntBASIC5.93□□□□□ -1.46
NINLQ9Y2I6 RN7SKP33-201ENST00000410942 340 ntBASIC5.93□□□□□ -1.46
NINLQ9Y2I6 AL445213.1-201ENST00000412589 747 ntBASIC5.93□□□□□ -1.46
NINLQ9Y2I6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.93□□□□□ -1.46
NINLQ9Y2I6 AC093578.1-201ENST00000415219 368 ntBASIC5.93□□□□□ -1.46
NINLQ9Y2I6 AL117339.2-201ENST00000430475 180 ntBASIC5.93□□□□□ -1.46
NINLQ9Y2I6 UBE2V2P4-201ENST00000447495 259 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms