Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 NPM1P47-201ENST00000560843 856 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC073137.1-201ENST00000605636 634 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AL035461.2-201ENST00000619201 524 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC000123.2-201ENST00000623124 461 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 U3.53-201ENST00000628922 216 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 OR10J6P-201ENST00000289731 930 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 RNA5SP509-201ENST00000364577 119 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 RNU6-1279P-201ENST00000383917 103 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 GSTA12P-201ENST00000402398 508 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 GTF2IP2-201ENST00000424290 697 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 RPS26P2-201ENST00000440331 348 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 MTCYBP12-201ENST00000440559 1134 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC108463.1-201ENST00000450258 347 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 RPL7AP28-201ENST00000464513 571 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 RPL23AP12-201ENST00000467573 473 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC034244.2-201ENST00000514668 858 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 RN7SKP21-201ENST00000516503 220 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC138701.1-201ENST00000524329 714 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AL020997.2-201ENST00000602607 184 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC115286.1-201ENST00000604298 434 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 IMMP1LP1-201ENST00000605170 488 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 OR6R2P-201ENST00000609216 300 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 MIR6716-201ENST00000613413 80 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AL133243.1-201ENST00000614487 366 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC123768.4-201ENST00000616244 701 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AL121890.3-201ENST00000618494 516 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AP005019.3-201ENST00000620418 560 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC019080.5-201ENST00000624891 757 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC068724.3-201ENST00000625906 87 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 AC139713.2-215ENST00000641428 5037 ntBASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TM9SF3Q9HD45 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC009951.1-201ENST00000623674 2614 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC108467.2-201ENST00000617640 1597 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 RNU6-891P-201ENST00000384280 111 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AL590762.2-201ENST00000395798 571 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 Z98745.1-201ENST00000402553 494 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 OR51B3P-201ENST00000412287 913 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 NDUFA5P1-201ENST00000433858 341 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 CBX1P1-201ENST00000440184 427 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 RPL23AP24-201ENST00000458203 385 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 EIF2S2P4-201ENST00000461070 984 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 RN7SL41P-201ENST00000476144 297 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC015795.1-201ENST00000513669 327 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 ACTR6P1-201ENST00000514311 1104 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 OR4V1P-201ENST00000525394 1140 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms