Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC209154.1-201ENST00000582156 337 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC022726.1-201ENST00000587475 207 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 MTCO2P2-201ENST00000591258 225 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL031320.1-201ENST00000604177 357 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 RMST_10.1-201ENST00000616309 154 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC068787.1-201ENST00000623908 691 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL627171.1-201ENST00000618845 1308 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 MAPK10-303ENST00000641324 3959 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 NCLP2-201ENST00000416078 1462 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AL450326.2-201ENST00000421913 1962 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AL136164.3-201ENST00000624429 3978 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 RNU6-468P-201ENST00000384003 109 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 HMGB3P19-201ENST00000403971 560 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 VDAC1P9-201ENST00000412766 841 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 DEFB130D-201ENST00000426866 237 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 MTND6P18-201ENST00000439477 513 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC073648.4-201ENST00000442655 781 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 RPL7P33-201ENST00000444159 742 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 PTMAP3-201ENST00000447474 330 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 OR1H1P-201ENST00000448731 937 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC063943.1-201ENST00000465434 453 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 HMGB1P38-201ENST00000490557 577 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC008427.1-201ENST00000503102 655 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 SNORA19.3-201ENST00000516165 130 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 RNU1-6P-201ENST00000516290 144 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC118942.1-201ENST00000529674 1035 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AP000916.1-201ENST00000533869 835 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 CYCSP28-201ENST00000534284 321 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC133555.2-201ENST00000550213 292 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 ATP5J2P6-201ENST00000565203 266 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 MIR4509-3-201ENST00000578671 94 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 SNORD39.2-201ENST00000579995 76 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC233702.9-201ENST00000581528 203 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 MIR4509-2-201ENST00000583920 94 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AL008729.2-201ENST00000606393 473 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC012557.1-201ENST00000607115 611 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 FAM27B-201ENST00000610601 213 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 MIR4509-1-201ENST00000618224 94 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC109809.1-201ENST00000619665 545 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC104118.1-201ENST00000607625 1589 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 EOGT-210ENST00000615922 1931 ntBASIC4.85□□□□□ -1.63
PCDH9Q9HC56 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH9Q9HC56 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 SCN1A-220ENST00000641603 12506 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 DDX18P4-201ENST00000511690 1966 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 MAPK10-263ENST00000641052 4307 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RNA5SP191-201ENST00000362585 102 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 MIR195-201ENST00000385194 87 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms