Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AC013553.2-201ENST00000604244 589 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 RNU6-88P-201ENST00000606801 100 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AC092266.1-201ENST00000610958 165 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AL512652.1-201ENST00000619006 500 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AL591135.1-201ENST00000401578 5914 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AC011504.1-201ENST00000623331 4103 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AC003985.2-201ENST00000562268 1669 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 AL731532.1-201ENST00000623972 4236 ntBASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP3Q9BWW4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 ZNF101P1-201ENST00000435701 1720 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 TMSB4XP2-201ENST00000335179 210 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 SNORA21-201ENST00000362423 132 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RNU1-134P-201ENST00000362935 165 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RNU6-1339P-201ENST00000363574 91 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RNU6-332P-201ENST00000391193 108 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 SNORA77.2-201ENST00000408571 112 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 MTND3P17-201ENST00000416968 344 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 CYP4F30P-202ENST00000420048 405 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL356583.2-201ENST00000426536 280 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC110602.1-201ENST00000437414 318 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RABEPKP1-201ENST00000440529 1026 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RPS26P30-201ENST00000443431 335 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 OR13K1P-201ENST00000444577 975 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 USP9YP12-201ENST00000450481 570 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 DNAJB5P1-201ENST00000454004 806 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 HSPE1P22-201ENST00000456856 327 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC135999.1-201ENST00000478962 479 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 HMGB1P29-201ENST00000505659 499 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 SNX5P1-201ENST00000505757 1041 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 Y_RNA.704-201ENST00000516851 102 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RN7SKP35-201ENST00000517210 151 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AP005639.1-201ENST00000526939 192 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RPA2P3-201ENST00000533268 770 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC008507.3-201ENST00000585753 472 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL139286.1-201ENST00000604465 483 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL591167.1-201ENST00000607321 456 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL050343.2-201ENST00000607338 280 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL136097.3-201ENST00000611097 505 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 RN7SL261P-201ENST00000613441 282 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 TCL6_3.1-201ENST00000619064 137 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC079684.1-201ENST00000621405 437 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL160413.1-201ENST00000622780 310 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AL645937.1-201ENST00000641739 1652 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC079097.1-201ENST00000512187 1399 ntBASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP3Q9BWW4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms