Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RHOT1P3-201ENST00000436571 331 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 OR7E125P-201ENST00000443450 846 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 DNAJC19P8-201ENST00000452887 259 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 MRPL35P4-201ENST00000453682 566 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC015908.1-201ENST00000478739 476 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RPL23AP37-201ENST00000479658 549 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 HMGN2P25-201ENST00000486956 268 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC092902.1-201ENST00000486999 259 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 BX510359.5-201ENST00000515651 304 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RNU5A-7P-201ENST00000515979 116 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RNA5SP43-201ENST00000516559 110 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RN7SKP260-201ENST00000516907 149 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 HMGB1P1-201ENST00000522557 636 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 GLRXP2-201ENST00000555594 321 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC090079.2-201ENST00000575289 768 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 VN1R88P-201ENST00000596787 292 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AP002906.1-201ENST00000603405 233 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AL121890.3-201ENST00000618494 516 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 MIR6861-201ENST00000618657 64 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AL022401.1-201ENST00000619498 108 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AL669942.2-201ENST00000620352 697 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AP006248.2-201ENST00000623309 592 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 LINC01808-202ENST00000641680 1116 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC008758.3-201ENST00000507003 1829 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 AC073055.1-201ENST00000456901 1621 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RPL22P22-201ENST00000395439 379 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 DNAJC19P6-201ENST00000401853 280 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 OR3A2-201ENST00000408891 1076 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RNA5SP146-201ENST00000410743 123 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 TBCAP2-201ENST00000416175 326 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC114814.2-201ENST00000419195 485 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RPL7P4-203ENST00000430239 730 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RPS27P18-201ENST00000431701 247 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC105402.2-201ENST00000438503 358 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 Z80107.2-201ENST00000445127 392 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC097484.1-201ENST00000471148 389 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 HMGB1P21-201ENST00000502313 581 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 HPRT1P2-201ENST00000505250 544 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC147055.3-201ENST00000510547 851 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RNU6-709P-201ENST00000517257 104 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL161713.1-201ENST00000555538 145 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC027455.1-201ENST00000574104 594 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 RN7SL622P-201ENST00000585292 275 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL627230.1-201ENST00000613077 211 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AL591926.8-201ENST00000616876 211 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms