Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC018926.1-201ENST00000616335 435 ntBASIC4.84□□□□□ -1.63
SEMA4DQ92854 AL121890.2-201ENST00000617644 465 ntBASIC4.84□□□□□ -1.63
SEMA4DQ92854 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.84□□□□□ -1.63
SEMA4DQ92854 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SEMA4DQ92854 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SEMA4DQ92854 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SEMA4DQ92854 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEMA4DQ92854 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SEMA4DQ92854 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.84□□□□□ -1.63
SEMA4DQ92854 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEMA4DQ92854 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SEMA4DQ92854 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SEMA4DQ92854 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.84□□□□□ -1.64
SEMA4DQ92854 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.84□□□□□ -1.64
SEMA4DQ92854 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.84□□□□□ -1.64
SEMA4DQ92854 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SEMA4DQ92854 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.84□□□□□ -1.64
SEMA4DQ92854 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 RNU6-1257P-201ENST00000384625 110 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AL158825.1-201ENST00000414735 521 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 RPL23AP4-201ENST00000427757 463 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 RPL23AP1-201ENST00000428990 471 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 MTCYBP12-201ENST00000440559 1134 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC090013.1-201ENST00000485147 480 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC093720.1-201ENST00000505681 714 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AP003355.1-201ENST00000518956 587 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC084759.1-201ENST00000561168 290 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 ATP5J2P6-201ENST00000565203 266 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC069061.3-201ENST00000582254 823 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 HMGB2P1-201ENST00000591146 634 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC008782.1-201ENST00000603386 430 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AC115286.1-201ENST00000604298 434 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AF129408.1-201ENST00000608767 431 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 AL353726.1-201ENST00000614041 1000 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 LINC01808-202ENST00000641680 1116 ntBASIC4.83□□□□□ -1.64
SEMA4DQ92854 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
SEMA4DQ92854 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEMA4DQ92854 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 AL592148.3-201ENST00000608771 2646 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 RAD17P1-201ENST00000418130 2042 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEMA4DQ92854 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEMA4DQ92854 MIR16-2-201ENST00000362117 81 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 RNU1-130P-201ENST00000363930 160 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 RNA5SP332-201ENST00000391063 115 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 RNU6-796P-201ENST00000391086 107 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 MIR937-201ENST00000401271 86 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEMA4DQ92854 SNRPFP1-201ENST00000414761 252 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 RPEP2-201ENST00000432149 701 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 ARL2BPP10-201ENST00000446487 531 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 AL096829.2-201ENST00000446582 742 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 CYCSP20-201ENST00000473154 315 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 RPL5P22-201ENST00000480199 884 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 AC007686.1-201ENST00000488511 463 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.82□□□□□ -1.64
SEMA4DQ92854 AP000827.1-201ENST00000527814 258 ntBASIC4.82□□□□□ -1.64
SEMA4DQ92854 OR5AN2P-201ENST00000534535 896 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms