Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL353748.1-201ENST00000440753 474 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 FTH1P11-201ENST00000517577 551 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 RN7SL703P-201ENST00000578485 302 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 RN7SL339P-201ENST00000580597 296 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 OR7M1P-201ENST00000608946 533 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL445363.3-201ENST00000623080 671 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 EIF2AP4-201ENST00000424793 1781 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC093849.1-201ENST00000563631 2209 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 IL6STP1-201ENST00000346911 1020 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AMZ2P2-201ENST00000406819 1057 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 RPL23AP26-201ENST00000412728 464 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 COX6CP15-201ENST00000426313 211 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL358472.1-201ENST00000431295 329 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 KCTD9P2-201ENST00000512203 1013 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AF131215.7-201ENST00000602443 707 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC008638.3-201ENST00000603341 463 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC112484.5-201ENST00000624189 228 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 SAMMSON-213ENST00000641336 1521 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 ARL4AP3-201ENST00000441452 574 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 AC090589.1-201ENST00000473109 362 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 PPBPP1-201ENST00000510807 373 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 YPEL5P3-201ENST00000547227 352 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 AC096577.2-201ENST00000611455 153 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 AL139254.3-201ENST00000641097 674 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 LARP1BP1-201ENST00000506036 1359 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 A2MP1-204ENST00000566278 4130 ntBASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM3Q8TF72 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 HSPD1P11-201ENST00000508643 1702 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 MIR372-201ENST00000362225 67 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 PPIAP31-201ENST00000405422 495 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RN7SKP33-201ENST00000410942 340 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RPS4XP4-201ENST00000443195 763 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RPL23AP81-201ENST00000455252 467 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RPS7P7-201ENST00000463499 571 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC008694.2-201ENST00000517591 306 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 UBTFL9-201ENST00000534504 1148 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC005858.4-201ENST00000623191 700 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 CDRT1-208ENST00000630868 794 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms