Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 CARF-208ENST00000428585 2513 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC007738.1-201ENST00000413892 348 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 TEX41-206ENST00000432608 661 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MIR6867-201ENST00000610636 67 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC092162.3-201ENST00000624511 1624 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RPS26P4-201ENST00000431743 355 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL356276.2-201ENST00000435919 558 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RNA5SP303-201ENST00000516192 130 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 OR5BC1P-201ENST00000529327 739 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MIR483-201ENST00000385070 76 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 OR5BE1P-201ENST00000425977 939 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL049874.2-201ENST00000492636 288 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 CDH12P2-201ENST00000504393 298 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC011471.1-201ENST00000585766 187 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 OR5BE1P-202ENST00000641168 1176 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MIR383-201ENST00000362257 73 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RNU1-14P-201ENST00000362759 152 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MIR30B-201ENST00000384850 88 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RN7SKP17-201ENST00000411242 351 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RPS4XP4-201ENST00000443195 763 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MTCO1P49-201ENST00000523429 802 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC012409.3-201ENST00000611343 981 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AP003497.2-201ENST00000624220 967 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC009093.8-201ENST00000641769 292 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC007382.1-201ENST00000624376 2618 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC140479.3-201ENST00000418944 1126 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC115285.1-201ENST00000424879 736 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 CKS1BP6-201ENST00000424932 240 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC099522.1-202ENST00000514718 367 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RNA5SP249-201ENST00000516127 99 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC107016.1-201ENST00000550463 337 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 OR8G7P-201ENST00000616658 848 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC139713.2-215ENST00000641428 5037 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RN7SKP74-201ENST00000362849 309 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 CGA-201ENST00000369582 729 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 EIF2S2P5-201ENST00000457635 968 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ANK3-207ENST00000460468 677 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 PSAT1P4-201ENST00000466500 526 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC146944.2-203ENST00000502493 354 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ENSA-211ENST00000503345 793 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC139495.1-202ENST00000513164 354 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 GMPSP1-201ENST00000514075 579 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms