Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC026368.1-201ENST00000614934 690 ntBASIC5.07□□□□□ -1.6
CPEB3Q8NE35 AL008636.1-201ENST00000625038 1018 ntBASIC5.07□□□□□ -1.6
CPEB3Q8NE35 AC005609.4-201ENST00000625071 447 ntBASIC5.07□□□□□ -1.6
CPEB3Q8NE35 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 MT-RNR2-201ENST00000387347 1559 ntBASIC5.07□□□□□ -1.6
CPEB3Q8NE35 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.07□□□□□ -1.6
CPEB3Q8NE35 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 Y_RNA.248-201ENST00000364501 109 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 RNY3P10-201ENST00000384764 102 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 RPS3AP2-201ENST00000407190 754 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 RNU2-22P-201ENST00000411266 212 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 RPL23AP39-201ENST00000415533 405 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC234781.4-201ENST00000419384 244 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 GAPDHP49-201ENST00000421421 961 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL009174.1-201ENST00000426577 416 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL139415.2-201ENST00000431968 163 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL050321.1-201ENST00000432363 400 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 GAPDHP48-201ENST00000436626 961 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AL592447.1-201ENST00000447592 540 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 COX6CP18-201ENST00000448769 222 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC093392.2-201ENST00000450682 337 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 PNPLA4P1-201ENST00000458328 305 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC090071.1-201ENST00000507713 644 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 RN7SKP31-201ENST00000516354 278 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 MTND4LP18-201ENST00000526864 291 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AP000648.1-201ENST00000529682 397 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 CBX3P7-201ENST00000532876 502 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 NANOGNBP2-201ENST00000544753 553 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AP005205.1-201ENST00000563503 508 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 MIR4260-201ENST00000583107 67 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 COX6CP7-201ENST00000597056 208 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 FAM27E4-201ENST00000605259 342 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC068276.1-201ENST00000605793 379 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC007684.1-201ENST00000609671 477 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC116651.1-201ENST00000609724 556 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC005962.2-201ENST00000611427 652 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC129915.3-201ENST00000634128 948 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 AC099654.12-201ENST00000639868 649 ntBASIC5.06□□□□□ -1.6
CPEB3Q8NE35 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CPEB3Q8NE35 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms