Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL133268.1-201ENST00000405676 1401 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AL590240.1-201ENST00000334118 313 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ELOCP19-201ENST00000411919 318 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ELOCP6-201ENST00000429066 328 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 OR2B7P-201ENST00000429302 934 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 TXNP5-201ENST00000441043 315 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ARL2BPP10-201ENST00000446487 531 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC239367.2-201ENST00000447309 705 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AL935212.3-201ENST00000450729 284 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 TVP23BP2-201ENST00000455082 615 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ELOCP12-201ENST00000458706 328 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 TRBV8-2-201ENST00000475637 270 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC013356.1-201ENST00000489027 564 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC012339.2-201ENST00000523996 453 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 OR5M2P-201ENST00000529003 936 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC068993.1-201ENST00000546724 589 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 Z82195.1-201ENST00000604558 398 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC005962.2-201ENST00000611427 652 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AL121873.1-201ENST00000616013 524 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC023510.2-201ENST00000622162 746 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC010608.3-201ENST00000625048 527 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 AC010329.2-201ENST00000595195 2737 ntBASIC5.36□□□□□ -1.55
HERC6Q8IVU3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
HERC6Q8IVU3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL022322.2-201ENST00000624072 20397 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC073136.1-201ENST00000449426 2884 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL645568.2-201ENST00000432815 1337 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RNU5B-1-201ENST00000363286 116 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RNA5SP223-201ENST00000365174 120 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 OR1L6-202ENST00000373684 1044 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RNU6-98P-201ENST00000384173 107 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 MIR129-1-201ENST00000384972 72 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RNU6-298P-201ENST00000390888 96 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RPL7P27-201ENST00000403775 720 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 GSTM3P2-201ENST00000412746 530 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RSU1P3-201ENST00000412878 835 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 TCEA1P2-201ENST00000420496 906 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL592293.2-201ENST00000422292 996 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RPS29P9-201ENST00000440360 171 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC099063.2-201ENST00000446360 662 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 SEPT14P24-201ENST00000447236 180 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RNU6-1218P-201ENST00000458990 108 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 METTL15P1-201ENST00000481421 1045 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RN7SL814P-201ENST00000487715 300 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 PRELID3BP6-201ENST00000503839 571 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC008565.1-201ENST00000509046 885 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC010285.3-201ENST00000511668 676 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC083923.1-201ENST00000523708 376 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms