Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC078899.1-201ENST00000521432 1185 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 AC107952.1-201ENST00000524200 376 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 AL109628.1-201ENST00000556877 366 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 pRNA.12-201ENST00000614353 90 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 pRNA.3-201ENST00000615048 90 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 ATP5A1P2-202ENST00000616464 443 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 MTCO1P24-201ENST00000515438 1558 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 THAP12P7-201ENST00000520248 2290 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 MIR335-201ENST00000362173 94 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 Y_RNA.126-201ENST00000363382 111 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 Y_RNA.304-201ENST00000365011 112 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 Y_RNA.352-201ENST00000365439 102 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 RNU6-398P-201ENST00000384143 109 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 RPS15AP12-201ENST00000419498 388 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AL136097.1-201ENST00000456945 913 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 RN7SL149P-201ENST00000465197 281 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 RN7SL751P-201ENST00000473281 284 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC011411.1-201ENST00000509592 876 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AP000648.1-201ENST00000529682 397 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 HAUS8P1-201ENST00000549005 542 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 NDUFA3P4-201ENST00000560814 250 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC018552.3-201ENST00000567416 561 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC090312.1-201ENST00000580637 348 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 MIR5188-201ENST00000583467 113 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC015818.6-201ENST00000584274 634 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC105224.1-201ENST00000587055 421 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC010424.2-201ENST00000607594 443 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AP001521.1-201ENST00000609150 300 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 MIR4272-201ENST00000635924 64 ntBASIC7.79□□□□□ -1.16
VARS2Q5ST30 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
VARS2Q5ST30 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARS2Q5ST30 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms