Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC133644.2-201ENST00000608142 540 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 AL590410.1-201ENST00000617925 333 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.05□□□□□ -1.76
RFX4Q33E94 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.05□□□□□ -1.76
RFX4Q33E94 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 AC131971.1-201ENST00000332881 1482 ntBASIC4.05□□□□□ -1.76
RFX4Q33E94 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX4Q33E94 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFX4Q33E94 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RFX4Q33E94 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.04□□□□□ -1.76
RFX4Q33E94 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFX4Q33E94 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RFX4Q33E94 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.04□□□□□ -1.76
RFX4Q33E94 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.04□□□□□ -1.76
RFX4Q33E94 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RFX4Q33E94 RN7SKP278-201ENST00000410504 342 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 RNU6-564P-201ENST00000410983 104 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.04□□□□□ -1.76
RFX4Q33E94 SEC63P1-201ENST00000425785 1258 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC234779.1-201ENST00000425910 285 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 RPS12P10-201ENST00000427031 377 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 RPEP2-201ENST00000432149 701 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AL049745.1-201ENST00000433953 286 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AL132765.1-201ENST00000434165 553 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.04□□□□□ -1.76
RFX4Q33E94 CLIC4P1-201ENST00000453177 535 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AC108145.1-201ENST00000503770 153 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 ATG10-AS1-201ENST00000504846 648 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 NDUFB5P1-201ENST00000508134 564 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AP001922.4-201ENST00000526967 290 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 OR8X1P-201ENST00000534542 869 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AC008147.3-201ENST00000548666 354 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.04□□□□□ -1.76
RFX4Q33E94 PCNPP1-201ENST00000552501 511 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AC009268.1-201ENST00000561352 1203 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC016180.1-201ENST00000567945 403 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.04□□□□□ -1.76
RFX4Q33E94 AL133338.2-201ENST00000604292 736 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.04□□□□□ -1.76
RFX4Q33E94 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFX4Q33E94 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.04□□□□□ -1.76
RFX4Q33E94 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.04□□□□□ -1.76
RFX4Q33E94 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFX4Q33E94 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFX4Q33E94 AL356317.1-201ENST00000396110 1436 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
RFX4Q33E94 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC017007.4-201ENST00000503353 1352 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.03□□□□□ -1.76
RFX4Q33E94 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.03□□□□□ -1.76
RFX4Q33E94 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 AL590240.1-201ENST00000334118 313 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RFX4Q33E94 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 RPS20P25-201ENST00000412447 352 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 RAC1P3-201ENST00000416129 580 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AL161631.1-201ENST00000417933 486 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
RFX4Q33E94 VN1R54P-201ENST00000435210 1049 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 PA2G4P6-201ENST00000438325 1197 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 YWHAZP2-201ENST00000440317 728 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 ELOCP10-201ENST00000440624 327 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 RPL23AP93-201ENST00000440847 484 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.03□□□□□ -1.76
RFX4Q33E94 RPL23AP43-201ENST00000446445 471 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 HMGB1P16-201ENST00000447155 540 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 HMGB3P22-202ENST00000451823 572 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 HIGD1AP8-201ENST00000453927 274 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AC091685.2-201ENST00000454924 864 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 RN7SL812P-201ENST00000493791 279 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.03□□□□□ -1.76
RFX4Q33E94 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.03□□□□□ -1.76
RFX4Q33E94 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC090819.1-201ENST00000523800 1111 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC109635.6-201ENST00000525487 1113 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms